Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is cfa [H]
Identifier: 120612212
GI number: 120612212
Start: 3937635
End: 3938693
Strand: Direct
Name: cfa [H]
Synonym: Aave_3565
Alternate gene names: 120612212
Gene position: 3937635-3938693 (Clockwise)
Preceding gene: 120612211
Following gene: 120612213
Centisome position: 73.56
GC content: 69.03
Gene sequence:
>1059_bases ATGCTGCAGAACAGCGCCACCGCCATCCGCCTCGTCGAACGGGGCCTGCTCCCCGACCGGCTCGTACGGCACGGCATCCG CCGGCTGCTGAAAGACCGGCTCGCCGAACTGCACAGCGGCGACGGGGCATCTGCGGCGGAGCAGACCCAGGCCTTCCTGG AGCGCATCCGCTCGGCGCCGCTCGCGCTGGTTCCCGAGAAAGCCAACGAGCAGCATTACGAGGTGCCTGCGGATTTCTTC GGCAAGGTGCTTGGGCCCCACCGCAAGTACAGCTGCTGCCTCTGGGCGGCCGGCACCACGACCCTGGAGCAGGCAGAGGA GGCCGCCCTCGCCGAGACCTGCGAGCATGCCGGCCTGCAGGACGGCCAGCGCATCCTGGAGCTGGGCTGCGGCTGGGGCT CGCTGACGCTGTGGATGGCGGCGCGCTACCCGGCCAGCATGATTACGGCCATTTCCAACTCGCACTCCCAGCGCCGGTAC ATCGAGGCGGAGGCCGCGCTCCGGGGACTGCGCAACGTGCGCGTGCAGACCTGCGACTTCAACGTCTTCGACACCGCGGA GCGCTTCGACCGGATCGTGTCGGTGGAAATGTTCGAGCACCTGCGCAACTGGCCGCGCGCCTTCTCGCACGTGGCACGCT GGCTGGCCGACGACGGCCGCTTCTTCATGCACGTGTTCACCCACCGGGAGGCCCCCTACCCGTTCGTCGCCCGGGACGCC AGCGACTGGATGAGCGAGCATTTCTTCTCGGGCGGCATGATGCCCAGCGACGACCTGGCACTGCACTGCCAGGACGACCT GCGCGTCGCGCGGCGCTGGCGATGGGAAGGCACCCACTACGCGAAGACATCGCGGGCGTGGCTGGACAACATGGACGCCC ACCACGCGGAGCTCCAGCCGCTGTTCCGGCAGGTGTACGGCGACGAGGCGGACACCTGGTGGATCCGCTGGCGTCTCTTC TTCCTGGCCGTCGAGGAACTCTTCGCCTACGGCGACGGCCAGCAGTGGTGGGTCAGCCACTACCTGTTCGACAAGCGGCC CGCGCACGGCGCGGCCTGA
Upstream 100 bases:
>100_bases ACGCCGGCGCGCCGGCGTCCTGCAATCCAAACAGGAGCCCGCCGCGTACAGGCCGGAACCAGGCGGGCCATCCGGCACGC CGCACGCCGGAGCCCCTCGC
Downstream 100 bases:
>100_bases CGGGACGGGAGGCCGGCATGGCGGATTTCTTTGGCACAGACGCCTGGCAGGCCGCGCTGGGCGGCCTGGCATGGACCGCC GGCGTGGCCCTGGCCACCTG
Product: cyclopropane-fatty-acyl-phospholipid synthase
Products: NA
Alternate protein names: CFA synthase; Cyclopropane fatty acid synthase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MLQNSATAIRLVERGLLPDRLVRHGIRRLLKDRLAELHSGDGASAAEQTQAFLERIRSAPLALVPEKANEQHYEVPADFF GKVLGPHRKYSCCLWAAGTTTLEQAEEAALAETCEHAGLQDGQRILELGCGWGSLTLWMAARYPASMITAISNSHSQRRY IEAEAALRGLRNVRVQTCDFNVFDTAERFDRIVSVEMFEHLRNWPRAFSHVARWLADDGRFFMHVFTHREAPYPFVARDA SDWMSEHFFSGGMMPSDDLALHCQDDLRVARRWRWEGTHYAKTSRAWLDNMDAHHAELQPLFRQVYGDEADTWWIRWRLF FLAVEELFAYGDGQQWWVSHYLFDKRPAHGAA
Sequences:
>Translated_352_residues MLQNSATAIRLVERGLLPDRLVRHGIRRLLKDRLAELHSGDGASAAEQTQAFLERIRSAPLALVPEKANEQHYEVPADFF GKVLGPHRKYSCCLWAAGTTTLEQAEEAALAETCEHAGLQDGQRILELGCGWGSLTLWMAARYPASMITAISNSHSQRRY IEAEAALRGLRNVRVQTCDFNVFDTAERFDRIVSVEMFEHLRNWPRAFSHVARWLADDGRFFMHVFTHREAPYPFVARDA SDWMSEHFFSGGMMPSDDLALHCQDDLRVARRWRWEGTHYAKTSRAWLDNMDAHHAELQPLFRQVYGDEADTWWIRWRLF FLAVEELFAYGDGQQWWVSHYLFDKRPAHGAA >Mature_352_residues MLQNSATAIRLVERGLLPDRLVRHGIRRLLKDRLAELHSGDGASAAEQTQAFLERIRSAPLALVPEKANEQHYEVPADFF GKVLGPHRKYSCCLWAAGTTTLEQAEEAALAETCEHAGLQDGQRILELGCGWGSLTLWMAARYPASMITAISNSHSQRRY IEAEAALRGLRNVRVQTCDFNVFDTAERFDRIVSVEMFEHLRNWPRAFSHVARWLADDGRFFMHVFTHREAPYPFVARDA SDWMSEHFFSGGMMPSDDLALHCQDDLRVARRWRWEGTHYAKTSRAWLDNMDAHHAELQPLFRQVYGDEADTWWIRWRLF FLAVEELFAYGDGQQWWVSHYLFDKRPAHGAA
Specific function: Transfers a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge [H]
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CFA/CMAS family [H]
Homologues:
Organism=Escherichia coli, GI1787951, Length=220, Percent_Identity=31.3636363636364, Blast_Score=116, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003333 [H]
Pfam domain/function: PF02353 CMAS [H]
EC number: =2.1.1.79 [H]
Molecular weight: Translated: 40591; Mature: 40591
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNSATAIRLVERGLLPDRLVRHGIRRLLKDRLAELHSGDGASAAEQTQAFLERIRSAP CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LALVPEKANEQHYEVPADFFGKVLGPHRKYSCCLWAAGTTTLEQAEEAALAETCEHAGLQ EEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC DGQRILELGCGWGSLTLWMAARYPASMITAISNSHSQRRYIEAEAALRGLRNVRVQTCDF HHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECC NVFDTAERFDRIVSVEMFEHLRNWPRAFSHVARWLADDGRFFMHVFTHREAPYPFVARDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCH SDWMSEHFFSGGMMPSDDLALHCQDDLRVARRWRWEGTHYAKTSRAWLDNMDAHHAELQP HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LFRQVYGDEADTWWIRWRLFFLAVEELFAYGDGQQWWVSHYLFDKRPAHGAA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLQNSATAIRLVERGLLPDRLVRHGIRRLLKDRLAELHSGDGASAAEQTQAFLERIRSAP CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LALVPEKANEQHYEVPADFFGKVLGPHRKYSCCLWAAGTTTLEQAEEAALAETCEHAGLQ EEEECCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCC DGQRILELGCGWGSLTLWMAARYPASMITAISNSHSQRRYIEAEAALRGLRNVRVQTCDF HHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECC NVFDTAERFDRIVSVEMFEHLRNWPRAFSHVARWLADDGRFFMHVFTHREAPYPFVARDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCH SDWMSEHFFSGGMMPSDDLALHCQDDLRVARRWRWEGTHYAKTSRAWLDNMDAHHAELQP HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LFRQVYGDEADTWWIRWRLFFLAVEELFAYGDGQQWWVSHYLFDKRPAHGAA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]