Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612201
Identifier: 120612201
GI number: 120612201
Start: 3927803
End: 3928480
Strand: Reverse
Name: 120612201
Synonym: Aave_3554
Alternate gene names: NA
Gene position: 3928480-3927803 (Counterclockwise)
Preceding gene: 120612203
Following gene: 120612200
Centisome position: 73.39
GC content: 64.31
Gene sequence:
>678_bases ATGGACCATAACAGTTTGTTGTACTCCTTACGTTCGCGCTGGCGGACGGGAGACGCATCGCCACGGCGCAGGGAGTCAGG GTTTACCCTGGTGGAGGTGCTGGTGTCGATCGTGGTGCTCTCGTTCGGCATCCTGGGGCTGGTCGGGGTGCAGGCCTTCG CGCTGCAATCGACCCGGGAGGCCCGCCTGCAGGCCCAGGCGGCCAACCTGGCGCGGGAGATGACTGAACTGATGCGGGGA AACAACCAAATTGCCATCAAGAGCGATGCCAGTTTGAATCCGTATCTCATCAATCTGCAGAGCCCGTTGAGCCCGGCTAC CGCCAATTATTGCCTGGGCGTGGCCTCGTCGTCCGCGTGCGCGGATGGGACGGCTGTGGCGCGTGCGGAACTGACCGATT GGCTTACGCGGCTGGATGCGGCCCTGCCCGGAGCGCGGGTGGTCATCTGTTTCGACAAGGCGCCCTACGACAGCAACGGC ATGCCGCGATGGGACTGCACTCCTGGAGCCGCTGGCGTGGATGAGGTGGCGGTCGTCAAGATCGGTTGGACCCGCAAATC CACGCTGCGCGCGTCTGCCACCAGTGACGGCGTGGAAACCGCCACGGCCAGCGGCAGCTATCCCTACGTGGTGTTTCCCG TCACGAGCGGCAACCCGGTGGAAGCCCCTTCGCTATGA
Upstream 100 bases:
>100_bases GGAGCGGAGGGCACGGACATCCCGGTATTTTGCGCCGACTGGTCGGATAGGCCCGCCGAACGGCATCGCCAGCGGAAAGC GGCCGGCCTAAGATTCCGGC
Downstream 100 bases:
>100_bases CTCGCTTTTCCCATCCCGTGACCCGCCGGTTACGGCAGAACGGCCTCACGCTCGTGGAGCTGATGGTCGCCATGGTCATC AGCCTGCTGATCGTGCTGGC
Product: type IV pilus modification protein PilV
Products: NA
Alternate protein names: Methylation
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MDHNSLLYSLRSRWRTGDASPRRRESGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTREARLQAQAANLAREMTELMRG NNQIAIKSDASLNPYLINLQSPLSPATANYCLGVASSSACADGTAVARAELTDWLTRLDAALPGARVVICFDKAPYDSNG MPRWDCTPGAAGVDEVAVVKIGWTRKSTLRASATSDGVETATASGSYPYVVFPVTSGNPVEAPSL
Sequences:
>Translated_225_residues MDHNSLLYSLRSRWRTGDASPRRRESGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTREARLQAQAANLAREMTELMRG NNQIAIKSDASLNPYLINLQSPLSPATANYCLGVASSSACADGTAVARAELTDWLTRLDAALPGARVVICFDKAPYDSNG MPRWDCTPGAAGVDEVAVVKIGWTRKSTLRASATSDGVETATASGSYPYVVFPVTSGNPVEAPSL >Mature_225_residues MDHNSLLYSLRSRWRTGDASPRRRESGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTREARLQAQAANLAREMTELMRG NNQIAIKSDASLNPYLINLQSPLSPATANYCLGVASSSACADGTAVARAELTDWLTRLDAALPGARVVICFDKAPYDSNG MPRWDCTPGAAGVDEVAVVKIGWTRKSTLRASATSDGVETATASGSYPYVVFPVTSGNPVEAPSL
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23895; Mature: 23895
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDHNSLLYSLRSRWRTGDASPRRRESGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTRE CCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLQAQAANLAREMTELMRGNNQIAIKSDASLNPYLINLQSPLSPATANYCLGVASSSAC HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHEEEECCCCCC ADGTAVARAELTDWLTRLDAALPGARVVICFDKAPYDSNGMPRWDCTPGAAGVDEVAVVK CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE IGWTRKSTLRASATSDGVETATASGSYPYVVFPVTSGNPVEAPSL ECCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MDHNSLLYSLRSRWRTGDASPRRRESGFTLVEVLVSIVVLSFGILGLVGVQAFALQSTRE CCCHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLQAQAANLAREMTELMRGNNQIAIKSDASLNPYLINLQSPLSPATANYCLGVASSSAC HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCHHHEEEECCCCCC ADGTAVARAELTDWLTRLDAALPGARVVICFDKAPYDSNGMPRWDCTPGAAGVDEVAVVK CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE IGWTRKSTLRASATSDGVETATASGSYPYVVFPVTSGNPVEAPSL ECCCCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA