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The map label for this gene is bphP [H]

Identifier: 120612190

GI number: 120612190

Start: 3914440

End: 3915927

Strand: Reverse

Name: bphP [H]

Synonym: Aave_3541

Alternate gene names: 120612190

Gene position: 3915927-3914440 (Counterclockwise)

Preceding gene: 120612191

Following gene: 120612188

Centisome position: 73.16

GC content: 61.96

Gene sequence:

>1488_bases
ATGTCATCAGCCGCTGAAACCAGGGACAGGAGCCTCTCCAACGCACACACTGGTTTTGCGGCGCTGGCCTCCGCCATCAG
CATCCTGTCGCTGGTGGGGTGGCTGACCAATCAGCAATCCCTCACCAGCCTCGCGGCAGGCCGGCCGCCTCTTTCCGTGA
TGACGGCTGTCATGGTGTTGCTGGGCGTGGTGGCGGTGCTGGCGTCTCCGCTGAAAGGCGCCATATCGTGGATTTTCGGC
ATATTGGTGGCAATGGGTGGCGTCGCCATCCTGATCGCTCGCGCAACGGCATTCGCGGCAGATATCGAGCTGCCTTCGGG
AATCTGGTCTTCGGCACTCACCGGGCTCATGTTCCTGTTGACCGGTACATCATCGGCCATGATAGGCAGGCGACTTTTCG
TCGAAGGCCAGCTCGTCGCCGTCGGTCTTTTGCTGGCCTCGGTGCTGTTGGGGCTGGGGCATCTTGTGCCGCTCAGTGTC
CTGTACCGATATCTGCCGGGCACAGGGGTTTCGATTCCCACGATCATCTGCTTTGTCTCTCTGGCCATCAGCGGTCTTCT
GGCATGTCGGCACAGCGGGATTGCCGCTTCGCTGTCGTCGGGGGGCGCCACAGGCAGGCCGGGCCTGAAAATGCTGCTGA
CGGGCGCTGCCTGTGTGCTGGTGGCCAGTGCCGCCGTGCTGGAAAGCCTGCGCGCGCACGTCATCGACGCCGAAACGGCC
ATCATGCTCCTGTGCTGGTCCGCGCTGGCGGCCTTGGGCGGGACGTTATGGGCCCTGGCGATTGCCGCCGGCAGGGCCGA
ACAGGCGACAGAGAATTCCAACCTGGAAAAAGAGAGGCTGCGCCAGACATTTGCCGCCGCCGTGACGCATGACTTGAGAA
ACCCCCTTCAAACCGCGATGCTTGCGGCCAACCTGCTGGCGAAGCTGAACGACGACCCGAAATTCGCCGGCCTGCTCGCG
AGGCTCCAGCGCAGTCACAAGCGCCTGGACAGGATGCTCAAGGCATCGCTGGACAAGATCGCGTTGGACAGCGGAAAAGA
GATGGCGGCCAACAAGTCCCTCGTGGACCTGCACAGCGTCATTGACGAGGTGGTGAGCGAGAACCTGGCCGTTCTCGAGG
AACGGGTCACCGTAGAAGGCCATGGCACTGGCCATTGGGATGCCGATGCCATTTTCCGGGTGGTCGAGAATCTGCTGCTC
AATGCCCTCAAGTATGGCAACCCCGGCACCGTCATCGAATGCTCCATCCAGAGCTCCGCCACGCACGTCCAGTTGCTGGT
TCACAACTCAGGGCCTCCCATTCCGGAAAGCGACTGGAGCAGGATCTTCGAGCCCTTCACGCGGGGGCAGAATCACCAGG
GCAGAACGGGTTGGGGCGTGGGCCTCGCTTTCTCCCGGATGGTGGCAGAGAAGCACAACGGTACATTGACGGTCGTTCGC
TCGGACGAACATGGCACCGTTTTCCAATTGACCTTGCCGTTGGAATGA

Upstream 100 bases:

>100_bases
ACCGGATGCGCCCCGTGGTTCCGGGGCCGTGCCGGGCGAGCCGCCGCTGAAAATCCGGCGAAGCCTCCTCGGAGCTTGAT
ATTTCCACGTGGAAACCGCG

Downstream 100 bases:

>100_bases
TCCGGGCCTCGCCGCAGGCCCGGGGCCGAGGCGTTACTGCTCCAGCGTTGCTCCGCGATCCCCCTGCCCGAACTTGCCGC
CGATTTCAGGCGCCGGGTGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSSAAETRDRSLSNAHTGFAALASAISILSLVGWLTNQQSLTSLAAGRPPLSVMTAVMVLLGVVAVLASPLKGAISWIFG
ILVAMGGVAILIARATAFAADIELPSGIWSSALTGLMFLLTGTSSAMIGRRLFVEGQLVAVGLLLASVLLGLGHLVPLSV
LYRYLPGTGVSIPTIICFVSLAISGLLACRHSGIAASLSSGGATGRPGLKMLLTGAACVLVASAAVLESLRAHVIDAETA
IMLLCWSALAALGGTLWALAIAAGRAEQATENSNLEKERLRQTFAAAVTHDLRNPLQTAMLAANLLAKLNDDPKFAGLLA
RLQRSHKRLDRMLKASLDKIALDSGKEMAANKSLVDLHSVIDEVVSENLAVLEERVTVEGHGTGHWDADAIFRVVENLLL
NALKYGNPGTVIECSIQSSATHVQLLVHNSGPPIPESDWSRIFEPFTRGQNHQGRTGWGVGLAFSRMVAEKHNGTLTVVR
SDEHGTVFQLTLPLE

Sequences:

>Translated_495_residues
MSSAAETRDRSLSNAHTGFAALASAISILSLVGWLTNQQSLTSLAAGRPPLSVMTAVMVLLGVVAVLASPLKGAISWIFG
ILVAMGGVAILIARATAFAADIELPSGIWSSALTGLMFLLTGTSSAMIGRRLFVEGQLVAVGLLLASVLLGLGHLVPLSV
LYRYLPGTGVSIPTIICFVSLAISGLLACRHSGIAASLSSGGATGRPGLKMLLTGAACVLVASAAVLESLRAHVIDAETA
IMLLCWSALAALGGTLWALAIAAGRAEQATENSNLEKERLRQTFAAAVTHDLRNPLQTAMLAANLLAKLNDDPKFAGLLA
RLQRSHKRLDRMLKASLDKIALDSGKEMAANKSLVDLHSVIDEVVSENLAVLEERVTVEGHGTGHWDADAIFRVVENLLL
NALKYGNPGTVIECSIQSSATHVQLLVHNSGPPIPESDWSRIFEPFTRGQNHQGRTGWGVGLAFSRMVAEKHNGTLTVVR
SDEHGTVFQLTLPLE
>Mature_494_residues
SSAAETRDRSLSNAHTGFAALASAISILSLVGWLTNQQSLTSLAAGRPPLSVMTAVMVLLGVVAVLASPLKGAISWIFGI
LVAMGGVAILIARATAFAADIELPSGIWSSALTGLMFLLTGTSSAMIGRRLFVEGQLVAVGLLLASVLLGLGHLVPLSVL
YRYLPGTGVSIPTIICFVSLAISGLLACRHSGIAASLSSGGATGRPGLKMLLTGAACVLVASAAVLESLRAHVIDAETAI
MLLCWSALAALGGTLWALAIAAGRAEQATENSNLEKERLRQTFAAAVTHDLRNPLQTAMLAANLLAKLNDDPKFAGLLAR
LQRSHKRLDRMLKASLDKIALDSGKEMAANKSLVDLHSVIDEVVSENLAVLEERVTVEGHGTGHWDADAIFRVVENLLLN
ALKYGNPGTVIECSIQSSATHVQLLVHNSGPPIPESDWSRIFEPFTRGQNHQGRTGWGVGLAFSRMVAEKHNGTLTVVRS
DEHGTVFQLTLPLE

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=29.6137339055794, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789808, Length=217, Percent_Identity=27.6497695852535, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788393, Length=238, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786783, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789149, Length=293, Percent_Identity=24.5733788395904, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=27.0042194092827, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 52050; Mature: 51919

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAAETRDRSLSNAHTGFAALASAISILSLVGWLTNQQSLTSLAAGRPPLSVMTAVMVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
LGVVAVLASPLKGAISWIFGILVAMGGVAILIARATAFAADIELPSGIWSSALTGLMFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TGTSSAMIGRRLFVEGQLVAVGLLLASVLLGLGHLVPLSVLYRYLPGTGVSIPTIICFVS
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAISGLLACRHSGIAASLSSGGATGRPGLKMLLTGAACVLVASAAVLESLRAHVIDAETA
HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLLCWSALAALGGTLWALAIAAGRAEQATENSNLEKERLRQTFAAAVTHDLRNPLQTAM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAANLLAKLNDDPKFAGLLARLQRSHKRLDRMLKASLDKIALDSGKEMAANKSLVDLHSV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
IDEVVSENLAVLEERVTVEGHGTGHWDADAIFRVVENLLLNALKYGNPGTVIECSIQSSA
HHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
THVQLLVHNSGPPIPESDWSRIFEPFTRGQNHQGRTGWGVGLAFSRMVAEKHNGTLTVVR
CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
SDEHGTVFQLTLPLE
ECCCCEEEEEEECCC
>Mature Secondary Structure 
SSAAETRDRSLSNAHTGFAALASAISILSLVGWLTNQQSLTSLAAGRPPLSVMTAVMVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
LGVVAVLASPLKGAISWIFGILVAMGGVAILIARATAFAADIELPSGIWSSALTGLMFLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TGTSSAMIGRRLFVEGQLVAVGLLLASVLLGLGHLVPLSVLYRYLPGTGVSIPTIICFVS
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAISGLLACRHSGIAASLSSGGATGRPGLKMLLTGAACVLVASAAVLESLRAHVIDAETA
HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMLLCWSALAALGGTLWALAIAAGRAEQATENSNLEKERLRQTFAAAVTHDLRNPLQTAM
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAANLLAKLNDDPKFAGLLARLQRSHKRLDRMLKASLDKIALDSGKEMAANKSLVDLHSV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHH
IDEVVSENLAVLEERVTVEGHGTGHWDADAIFRVVENLLLNALKYGNPGTVIECSIQSSA
HHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
THVQLLVHNSGPPIPESDWSRIFEPFTRGQNHQGRTGWGVGLAFSRMVAEKHNGTLTVVR
CEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
SDEHGTVFQLTLPLE
ECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]