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The map label for this gene is 120612188

Identifier: 120612188

GI number: 120612188

Start: 3913054

End: 3913665

Strand: Reverse

Name: 120612188

Synonym: Aave_3539

Alternate gene names: NA

Gene position: 3913665-3913054 (Counterclockwise)

Preceding gene: 120612190

Following gene: 120612186

Centisome position: 73.11

GC content: 68.14

Gene sequence:

>612_bases
ATGTCAAGCCATCCGAAGAAGCCGGACGCAGGCCGTGCGATCCAGCGGCGCCTGCCCAAGGAGGCCCGGCAGCGCCAGTT
GCTGGATGTCGCGTGGTCCATCGTGCGCAGCGAAGGCAGCGATGCGCTCACGCTGGGCCATCTGGCCGAGCGCGCGGGCG
TGACCAAGCCCGTCGTCTATGACCATTACGGGACGCGCAACGGTCTGCTGGCGGCGCTCTACGAGGAGTACGACGGCAGG
CAGCATGCGCGGCTGGACGAGGCCCTCGCCGCCTGTACCAGGACGCTTCCGGCGGTGGCCCAGGTCATCGCCGCGAGCTA
CGTCGGGTGCGTCATGACCATGGGCCGGGAAATGCCGGGCGTGAGCGCGGCGCTGGCGGGCTCACCCGAGCTGGACGCCT
TGAAGAAGGCGCATGAAACCCTCTTCATGGACAAGTGCCGCCACGCGCTCGAGCCTTTTGCGAAGAAGCCTTTGAAGCAG
GCCGCCATGCGCGCCATGCTGGGGGTGGCCGAGGCGGTGTCCTTCGCGGCACTGGCAGGGGAGGTGGAACCCGTGGACGC
AGAGGAGGAGATCTACGACGCGATCCGGCGGATCACGCGCAGGGGTGGATAA

Upstream 100 bases:

>100_bases
GGTGGCTGACGACGATGAGGGCGTGCATGGGACATCCTTGTGGCGAAGTTAAATTACCATTCGTATATTAGCACTGCAAA
CTACTTTTGGTAGGTTAACC

Downstream 100 bases:

>100_bases
GCCCCCCGCACCGCGCCGCGCGCGAGGGGCTTTTTCAGCATTGCCTCAATTCGGGAAGGCGACGCCGACCAGCGGACTGC
GCAGGCTGGCCGCGTTGCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSSHPKKPDAGRAIQRRLPKEARQRQLLDVAWSIVRSEGSDALTLGHLAERAGVTKPVVYDHYGTRNGLLAALYEEYDGR
QHARLDEALAACTRTLPAVAQVIAASYVGCVMTMGREMPGVSAALAGSPELDALKKAHETLFMDKCRHALEPFAKKPLKQ
AAMRAMLGVAEAVSFAALAGEVEPVDAEEEIYDAIRRITRRGG

Sequences:

>Translated_203_residues
MSSHPKKPDAGRAIQRRLPKEARQRQLLDVAWSIVRSEGSDALTLGHLAERAGVTKPVVYDHYGTRNGLLAALYEEYDGR
QHARLDEALAACTRTLPAVAQVIAASYVGCVMTMGREMPGVSAALAGSPELDALKKAHETLFMDKCRHALEPFAKKPLKQ
AAMRAMLGVAEAVSFAALAGEVEPVDAEEEIYDAIRRITRRGG
>Mature_202_residues
SSHPKKPDAGRAIQRRLPKEARQRQLLDVAWSIVRSEGSDALTLGHLAERAGVTKPVVYDHYGTRNGLLAALYEEYDGRQ
HARLDEALAACTRTLPAVAQVIAASYVGCVMTMGREMPGVSAALAGSPELDALKKAHETLFMDKCRHALEPFAKKPLKQA
AMRAMLGVAEAVSFAALAGEVEPVDAEEEIYDAIRRITRRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22035; Mature: 21903

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHPKKPDAGRAIQRRLPKEARQRQLLDVAWSIVRSEGSDALTLGHLAERAGVTKPVVY
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
DHYGTRNGLLAALYEEYDGRQHARLDEALAACTRTLPAVAQVIAASYVGCVMTMGREMPG
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VSAALAGSPELDALKKAHETLFMDKCRHALEPFAKKPLKQAAMRAMLGVAEAVSFAALAG
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EVEPVDAEEEIYDAIRRITRRGG
CCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSHPKKPDAGRAIQRRLPKEARQRQLLDVAWSIVRSEGSDALTLGHLAERAGVTKPVVY
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
DHYGTRNGLLAALYEEYDGRQHARLDEALAACTRTLPAVAQVIAASYVGCVMTMGREMPG
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VSAALAGSPELDALKKAHETLFMDKCRHALEPFAKKPLKQAAMRAMLGVAEAVSFAALAG
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EVEPVDAEEEIYDAIRRITRRGG
CCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA