Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ureE
Identifier: 120612182
GI number: 120612182
Start: 3904968
End: 3905600
Strand: Direct
Name: ureE
Synonym: Aave_3531
Alternate gene names: 120612182
Gene position: 3904968-3905600 (Clockwise)
Preceding gene: 120612181
Following gene: 120612183
Centisome position: 72.95
GC content: 70.46
Gene sequence:
>633_bases ATGCTGACCGCCAACAAACTCCTTCCCCAGGGCCACGGCCTCGCCCCCGTCCTGCTCAAGCGCGCCGCCACCGTCGAACT CGACTGGGACGTGCGCCAGAAAAGCCGCTTCGCCGCCACCGACTCCACCGGGCGCGAACTGGGCGTCTTCCTGCCCCGCG GCACCGTCGTGCGCGGCGGCGACGTGCTGGTGGCCGAGGACGGCAGCATGGTCCGCGTGGTCGCCGCGCCCCAGGCCGTG CTGCGCATCACCCACTGCACGCAGCACGGCAGCCCCTTCGACCTCACCCGCGCCGCCTACCACCTCGGCAACCGCCACGT GCCGATCGAACTGCGCCCGGACCACCTGCAGATCGAACCCGACCACGTGCTCGCCGACATGCTGCGCGCCATGCACCTCA TCGTCACCGAGCAGCAGGCGCCTTTCGAGCCCGAAGGCGGCGCGTATGCGGCGGGAGGGCACGGGCACGGCCATGACCAT CCGCATCACGATCACGGGCATGACCACGCCCATGCTCACGCGCATGGCACCGAAGCTTGCGACCACGAGCACAGCCACGA CCACGACTGCGGCCACCACCACGATCACGGCCAGGACTATGGCCACGCCCATCCGCATTCCCTCGCCCGCTGA
Upstream 100 bases:
>100_bases TGACCCACACGCATCCGCCAGGCGCCCGCCGGCCGGCCCCAGGCGCCCGGACAGGGCCGCCAAGCCGCAGAATGGCGTTT TCGCCGCCCAGGACACCGAC
Downstream 100 bases:
>100_bases CGCGCGCATGGCGCCTGCACCCGATCCCGCTCCCGCCGGTTCCGCAGCACCTGATCCGGCATCGGCGCCACAAGGCCTGC CCGCGGCCAGCCTGCTGCAG
Product: UreE urease accessory domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLTANKLLPQGHGLAPVLLKRAATVELDWDVRQKSRFAATDSTGRELGVFLPRGTVVRGGDVLVAEDGSMVRVVAAPQAV LRITHCTQHGSPFDLTRAAYHLGNRHVPIELRPDHLQIEPDHVLADMLRAMHLIVTEQQAPFEPEGGAYAAGGHGHGHDH PHHDHGHDHAHAHAHGTEACDHEHSHDHDCGHHHDHGQDYGHAHPHSLAR
Sequences:
>Translated_210_residues MLTANKLLPQGHGLAPVLLKRAATVELDWDVRQKSRFAATDSTGRELGVFLPRGTVVRGGDVLVAEDGSMVRVVAAPQAV LRITHCTQHGSPFDLTRAAYHLGNRHVPIELRPDHLQIEPDHVLADMLRAMHLIVTEQQAPFEPEGGAYAAGGHGHGHDH PHHDHGHDHAHAHAHGTEACDHEHSHDHDCGHHHDHGQDYGHAHPHSLAR >Mature_210_residues MLTANKLLPQGHGLAPVLLKRAATVELDWDVRQKSRFAATDSTGRELGVFLPRGTVVRGGDVLVAEDGSMVRVVAAPQAV LRITHCTQHGSPFDLTRAAYHLGNRHVPIELRPDHLQIEPDHVLADMLRAMHLIVTEQQAPFEPEGGAYAAGGHGHGHDH PHHDHGHDHAHAHAHGTEACDHEHSHDHDCGHHHDHGQDYGHAHPHSLAR
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_ACIAC (A1TSZ8)
Other databases:
- EMBL: CP000512 - RefSeq: YP_971860.1 - ProteinModelPortal: A1TSZ8 - SMR: A1TSZ8 - STRING: A1TSZ8 - GeneID: 4667472 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_3531 - NMPDR: fig|397945.5.peg.3018 - eggNOG: COG2371 - HOGENOM: HBG635302 - OMA: DARCKSR - BioCyc: AAVE397945:AAVE_3531-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 22977; Mature: 22977
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTANKLLPQGHGLAPVLLKRAATVELDWDVRQKSRFAATDSTGRELGVFLPRGTVVRGG CCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEECCCCCCCEEEEEECCCEEEECC DVLVAEDGSMVRVVAAPQAVLRITHCTQHGSPFDLTRAAYHLGNRHVPIELRPDHLQIEP CEEEECCCCEEEEEECCHHHHEEHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECH DHVLADMLRAMHLIVTEQQAPFEPEGGAYAAGGHGHGHDHPHHDHGHDHAHAHAHGTEAC HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHEHSHDHDCGHHHDHGQDYGHAHPHSLAR CCCCCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MLTANKLLPQGHGLAPVLLKRAATVELDWDVRQKSRFAATDSTGRELGVFLPRGTVVRGG CCCCCCCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEECCCCCCCEEEEEECCCEEEECC DVLVAEDGSMVRVVAAPQAVLRITHCTQHGSPFDLTRAAYHLGNRHVPIELRPDHLQIEP CEEEECCCCEEEEEECCHHHHEEHHHHCCCCCCHHHHHHHHHCCCCCEEEECCCCEEECH DHVLADMLRAMHLIVTEQQAPFEPEGGAYAAGGHGHGHDHPHHDHGHDHAHAHAHGTEAC HHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DHEHSHDHDCGHHHDHGQDYGHAHPHSLAR CCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA