Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612173
Identifier: 120612173
GI number: 120612173
Start: 3893453
End: 3893779
Strand: Direct
Name: 120612173
Synonym: Aave_3522
Alternate gene names: NA
Gene position: 3893453-3893779 (Clockwise)
Preceding gene: 120612172
Following gene: 120612177
Centisome position: 72.74
GC content: 68.5
Gene sequence:
>327_bases ATGCCCCGAGCCGCCTGGAGCGACAAGCGCGAGCGCCAGTACGAACACATCAAGGACAGCCTCGAAGATCGCGGCCGCAG CGAAAAGACGGCCGAACAGATCGCGGCGCGCACCGTCAACAAGGAGCGCGCCCAGCACGGCGAGGCGAAGAAGGCCAACC CGAAGACCGTGCACGACACCCCCGCGCCCGTGCGCGGCGGCCAGCGCTCCCACACCGGCTCGCAGGGTCGCACGCGCGAG CAGCTCTACGAAGAGGCGCGCAAGAAGAACATCGCCGGCCGCTCGAAGATGAACAAGGCCGAGCTGGAAAAGGCCGTGGG GCGCTGA
Upstream 100 bases:
>100_bases CATGCCCGCGGCGCCGACACGCACGGAACGCCTCACGCCGTCAGATAGCGCAAGGGGCTTTCCCCGTTGTTCCCTCATCC ACCACGCCAAGGAGTCCGCC
Downstream 100 bases:
>100_bases AGGGCCGCGTGCCGGGCGCCGGTCAGGCGCCTGCGCCAGCGCCGGGCCCGGAAGCCGCAGCGGCGCCCCACAGCCGGTCC AGTTGCTCCGGCGGCAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPRAAWSDKRERQYEHIKDSLEDRGRSEKTAEQIAARTVNKERAQHGEAKKANPKTVHDTPAPVRGGQRSHTGSQGRTRE QLYEEARKKNIAGRSKMNKAELEKAVGR
Sequences:
>Translated_108_residues MPRAAWSDKRERQYEHIKDSLEDRGRSEKTAEQIAARTVNKERAQHGEAKKANPKTVHDTPAPVRGGQRSHTGSQGRTRE QLYEEARKKNIAGRSKMNKAELEKAVGR >Mature_107_residues PRAAWSDKRERQYEHIKDSLEDRGRSEKTAEQIAARTVNKERAQHGEAKKANPKTVHDTPAPVRGGQRSHTGSQGRTREQ LYEEARKKNIAGRSKMNKAELEKAVGR
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12275; Mature: 12144
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAAWSDKRERQYEHIKDSLEDRGRSEKTAEQIAARTVNKERAQHGEAKKANPKTVHDT CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PAPVRGGQRSHTGSQGRTREQLYEEARKKNIAGRSKMNKAELEKAVGR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCC >Mature Secondary Structure PRAAWSDKRERQYEHIKDSLEDRGRSEKTAEQIAARTVNKERAQHGEAKKANPKTVHDT CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PAPVRGGQRSHTGSQGRTREQLYEEARKKNIAGRSKMNKAELEKAVGR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA