Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612172
Identifier: 120612172
GI number: 120612172
Start: 3892687
End: 3893265
Strand: Direct
Name: 120612172
Synonym: Aave_3521
Alternate gene names: NA
Gene position: 3892687-3893265 (Clockwise)
Preceding gene: 120612169
Following gene: 120612173
Centisome position: 72.72
GC content: 73.58
Gene sequence:
>579_bases ATGCGCCTGCATGCGTTTGCCGTGCCATCCGACACGCGGACCGGCGCGCGGTTGGCGATGATGCGTCGTCCCCTTCCCCG ACAGGAGCCCCACATGCCCATCGACTGGAAACGCGCGCTGCGCGAAGGCGCCATCGCCGGCAGCTGCGCCAGCGTACTCT CCACCCTGGCTCTGCTGTGGGCGGGACGGCGCCAGGCCCGCGCCGCCATCACGCCCGTCAACGCCGTGAGCCACTGGATC TGGGGCGACACCGCACTGCGCGAACACCGCCCGAGACTCTCCCACACCCTGCCCGGCTACGCCATCCACCACGGCGCCTC CGTGTTCTGGGCCACGGCCAGCGCCGCCGCCCGCGACGCCGCGCGCGGCGCGCCCGAAACCTCCTGGCCGGCGATCTGCC AGCGTGCGGCGGCCACGTCCGCCGTTGCCTGCTGGGTCGATTTCCAGCTCACGCCGCGCCGCTTCACGCCCGGCTTCGAG CACCATCTGGGGCATGGCGCGCTGGCCGCCGTGTACCTGGCGTTCGGTGCGGGGCTGGCCCTGGGCACCGTGCTCGTGCA GCGCTCCGGGCGGTCCTGA
Upstream 100 bases:
>100_bases TAGAACGCCGTTCCGATACCGGTGCCGAACAGGACCGTGGACGAGAGAATGTGCAGCCACTTGGCAATGAAATACTCCAT GGAAACCTTCCCGTGAATGC
Downstream 100 bases:
>100_bases TACCGCGCCCCTCGCGGCGCGGCCTGAGCGTGTCCCCAGGCATGGCAAACCGCGTTCCCGGCACGGCGGTGCGGCGTCCT ACGGCCGCATGCCCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MRLHAFAVPSDTRTGARLAMMRRPLPRQEPHMPIDWKRALREGAIAGSCASVLSTLALLWAGRRQARAAITPVNAVSHWI WGDTALREHRPRLSHTLPGYAIHHGASVFWATASAAARDAARGAPETSWPAICQRAAATSAVACWVDFQLTPRRFTPGFE HHLGHGALAAVYLAFGAGLALGTVLVQRSGRS
Sequences:
>Translated_192_residues MRLHAFAVPSDTRTGARLAMMRRPLPRQEPHMPIDWKRALREGAIAGSCASVLSTLALLWAGRRQARAAITPVNAVSHWI WGDTALREHRPRLSHTLPGYAIHHGASVFWATASAAARDAARGAPETSWPAICQRAAATSAVACWVDFQLTPRRFTPGFE HHLGHGALAAVYLAFGAGLALGTVLVQRSGRS >Mature_192_residues MRLHAFAVPSDTRTGARLAMMRRPLPRQEPHMPIDWKRALREGAIAGSCASVLSTLALLWAGRRQARAAITPVNAVSHWI WGDTALREHRPRLSHTLPGYAIHHGASVFWATASAAARDAARGAPETSWPAICQRAAATSAVACWVDFQLTPRRFTPGFE HHLGHGALAAVYLAFGAGLALGTVLVQRSGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20737; Mature: 20737
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHAFAVPSDTRTGARLAMMRRPLPRQEPHMPIDWKRALREGAIAGSCASVLSTLALLW CCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH AGRRQARAAITPVNAVSHWIWGDTALREHRPRLSHTLPGYAIHHGASVFWATASAAARDA HCCHHHHHHCCHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEECCCCCCEEHHHHHHHHHH ARGAPETSWPAICQRAAATSAVACWVDFQLTPRRFTPGFEHHLGHGALAAVYLAFGAGLA HCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHH LGTVLVQRSGRS HHHHHHHCCCCC >Mature Secondary Structure MRLHAFAVPSDTRTGARLAMMRRPLPRQEPHMPIDWKRALREGAIAGSCASVLSTLALLW CCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH AGRRQARAAITPVNAVSHWIWGDTALREHRPRLSHTLPGYAIHHGASVFWATASAAARDA HCCHHHHHHCCHHHHHHHHHCCCHHHHHCCCHHHHCCCCCEECCCCCCEEHHHHHHHHHH ARGAPETSWPAICQRAAATSAVACWVDFQLTPRRFTPGFEHHLGHGALAAVYLAFGAGLA HCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHH LGTVLVQRSGRS HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA