Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is mmlH [H]
Identifier: 120612165
GI number: 120612165
Start: 3885229
End: 3886518
Strand: Reverse
Name: mmlH [H]
Synonym: Aave_3514
Alternate gene names: 120612165
Gene position: 3886518-3885229 (Counterclockwise)
Preceding gene: 120612170
Following gene: 120612164
Centisome position: 72.61
GC content: 67.21
Gene sequence:
>1290_bases GTGCCATGGGTCTCTTCCCTTCGCAGAAACGGAACACGCACCATGTGGCTCAAGGAAACCAGCAAGGAAGAGCGCAAGAC GCTCTTCGCCGCCTTCGTCGGCTATGGCGTCGATGCGTTCGACTACATGATCTATACGTTCATGATCCCGACCTTCATCC TGGTCTGGGGCATGACCAAGGCCGAGGCGGGCTATATCGCCACCGGCGCGCTCATCAGCTCGGCCATCGGCGGCTGGCTG GCGGGCATCCTGGCCGACCGCTACGGCCGCGTGCGCATCCTGCAGCTGACGGTGCTCTGGTTCAGCTTCTTCACCTTCCT GAGCGGCTTCACCCAGTCGGCCGAGCAGCTCTTCATCACCCGCATGCTGCAGGGCCTGGGCTTCGGCGGCGAGTGGTCGG TGGGCTCGGTGCTGATCGCCGAGATGATCCGCGCCCGCCACCGCGGCAAGGCCGTGGGCCTGGTGCAGAGCAGCTGGGCG GTGGGCTGGGGCCTGTCGGCCGTCGCCTTCTGGGCCGTCTATGCGCTGGTGGAGCAGCAATACGCCTGGCGCGTGCTGTT CTGGCTGGGCGCGCTGCCGGCCCTGTTCATCCTCTACATCCGCCGCAACATCAGCGAGCCCGCCGTCTATCGCGAAACCA AGGCGCAGCTGGCCCGCACGGGGCAGAGCAGCGGCTTCTGGCTGATCTTCAAGCCGGGCGTGCTGCGCACCACGGTGTTC GCCAGCCTGCTGGCCACCGGCATGCAGGGCGCCTACTATGCGGTCACCACCTGGCTGCCCACCTACCTGAAGATGGAACG CAACCTGTCGGTGCTGGGCACCAGCGGCTACCTGATGGTGCTGATCTTCGGCTCGTTCGCGGGCTACCTCACCAGCGCGT GGCTGTCCGACCGCCTGGGCCGCCGCCGCTGCTTCATCCTGTTCGCCGTCTGCGCGGGCGTCCTGGTCACCTGCTATACG CAGCTGCCGATCACCGACGCCGCCATGATGGTGCTGGGCTTCCCGCTGGGTTTCTTCCTCTCGGGCATCTTCTCGGGCAT GGGCGCCTACCTGTCCGAGCTGTTCCCCAGCCACATCCGGGGCTCCGGCCAGGGCTTTTGCTACAACTTCGGCCGCGCCG TGGGCTCGGTGTTCCCGGCGATGATCGGCCACATGAGCGCCAGCATGCCGCTGGGCGTGTCCATCGGCTACATGGCCGCG GGCGCCTACCTGATCGTCGTCATCGCCTGCCTGGCGCTGCCGGAAACGCAGGGGCGCGAGCTCTCCGCCAGCACCGACGC GGCGGCCTGA
Upstream 100 bases:
>100_bases GTAATCCCCATCAACGATCCAAATCAAATTGTTCAACAATTTATGCAGATGATTCATCAATGGATGGGTTCCTGATGAAA CATGGCGCGGTGATTGCTCT
Downstream 100 bases:
>100_bases GCGGCGCTGTCTCCGGCTTCCTGCCGGCGCTCCATTCCTCGACGTTCTTTTCCTCTCGTATGCATATCGACCTGAACAGC GACCTGGGCGAAAGCCTGGG
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPWVSSLRRNGTRTMWLKETSKEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTKAEAGYIATGALISSAIGGWL AGILADRYGRVRILQLTVLWFSFFTFLSGFTQSAEQLFITRMLQGLGFGGEWSVGSVLIAEMIRARHRGKAVGLVQSSWA VGWGLSAVAFWAVYALVEQQYAWRVLFWLGALPALFILYIRRNISEPAVYRETKAQLARTGQSSGFWLIFKPGVLRTTVF ASLLATGMQGAYYAVTTWLPTYLKMERNLSVLGTSGYLMVLIFGSFAGYLTSAWLSDRLGRRRCFILFAVCAGVLVTCYT QLPITDAAMMVLGFPLGFFLSGIFSGMGAYLSELFPSHIRGSGQGFCYNFGRAVGSVFPAMIGHMSASMPLGVSIGYMAA GAYLIVVIACLALPETQGRELSASTDAAA
Sequences:
>Translated_429_residues MPWVSSLRRNGTRTMWLKETSKEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTKAEAGYIATGALISSAIGGWL AGILADRYGRVRILQLTVLWFSFFTFLSGFTQSAEQLFITRMLQGLGFGGEWSVGSVLIAEMIRARHRGKAVGLVQSSWA VGWGLSAVAFWAVYALVEQQYAWRVLFWLGALPALFILYIRRNISEPAVYRETKAQLARTGQSSGFWLIFKPGVLRTTVF ASLLATGMQGAYYAVTTWLPTYLKMERNLSVLGTSGYLMVLIFGSFAGYLTSAWLSDRLGRRRCFILFAVCAGVLVTCYT QLPITDAAMMVLGFPLGFFLSGIFSGMGAYLSELFPSHIRGSGQGFCYNFGRAVGSVFPAMIGHMSASMPLGVSIGYMAA GAYLIVVIACLALPETQGRELSASTDAAA >Mature_428_residues PWVSSLRRNGTRTMWLKETSKEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTKAEAGYIATGALISSAIGGWLA GILADRYGRVRILQLTVLWFSFFTFLSGFTQSAEQLFITRMLQGLGFGGEWSVGSVLIAEMIRARHRGKAVGLVQSSWAV GWGLSAVAFWAVYALVEQQYAWRVLFWLGALPALFILYIRRNISEPAVYRETKAQLARTGQSSGFWLIFKPGVLRTTVFA SLLATGMQGAYYAVTTWLPTYLKMERNLSVLGTSGYLMVLIFGSFAGYLTSAWLSDRLGRRRCFILFAVCAGVLVTCYTQ LPITDAAMMVLGFPLGFFLSGIFSGMGAYLSELFPSHIRGSGQGFCYNFGRAVGSVFPAMIGHMSASMPLGVSIGYMAAG AYLIVVIACLALPETQGRELSASTDAAA
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=444, Percent_Identity=23.6486486486486, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI213021148, Length=445, Percent_Identity=22.6966292134831, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI87082404, Length=383, Percent_Identity=26.8929503916449, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI87082231, Length=460, Percent_Identity=25, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1790550, Length=464, Percent_Identity=26.0775862068966, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI87081723, Length=361, Percent_Identity=26.8698060941828, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI87082159, Length=336, Percent_Identity=28.2738095238095, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788068, Length=394, Percent_Identity=25.3807106598985, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1788942, Length=392, Percent_Identity=25.2551020408163, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789152, Length=366, Percent_Identity=24.5901639344262, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788292, Length=400, Percent_Identity=26.5, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786229, Length=396, Percent_Identity=22.4747474747475, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32564663, Length=438, Percent_Identity=24.6575342465753, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47059; Mature: 46928
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWVSSLRRNGTRTMWLKETSKEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTK CCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC AEAGYIATGALISSAIGGWLAGILADRYGRVRILQLTVLWFSFFTFLSGFTQSAEQLFIT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLQGLGFGGEWSVGSVLIAEMIRARHRGKAVGLVQSSWAVGWGLSAVAFWAVYALVEQQ HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHH YAWRVLFWLGALPALFILYIRRNISEPAVYRETKAQLARTGQSSGFWLIFKPGVLRTTVF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH ASLLATGMQGAYYAVTTWLPTYLKMERNLSVLGTSGYLMVLIFGSFAGYLTSAWLSDRLG HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC RRRCFILFAVCAGVLVTCYTQLPITDAAMMVLGFPLGFFLSGIFSGMGAYLSELFPSHIR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC GSGQGFCYNFGRAVGSVFPAMIGHMSASMPLGVSIGYMAAGAYLIVVIACLALPETQGRE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC LSASTDAAA CCCCCCCCC >Mature Secondary Structure PWVSSLRRNGTRTMWLKETSKEERKTLFAAFVGYGVDAFDYMIYTFMIPTFILVWGMTK CCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC AEAGYIATGALISSAIGGWLAGILADRYGRVRILQLTVLWFSFFTFLSGFTQSAEQLFIT CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLQGLGFGGEWSVGSVLIAEMIRARHRGKAVGLVQSSWAVGWGLSAVAFWAVYALVEQQ HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHH YAWRVLFWLGALPALFILYIRRNISEPAVYRETKAQLARTGQSSGFWLIFKPGVLRTTVF HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH ASLLATGMQGAYYAVTTWLPTYLKMERNLSVLGTSGYLMVLIFGSFAGYLTSAWLSDRLG HHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHC RRRCFILFAVCAGVLVTCYTQLPITDAAMMVLGFPLGFFLSGIFSGMGAYLSELFPSHIR HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC GSGQGFCYNFGRAVGSVFPAMIGHMSASMPLGVSIGYMAAGAYLIVVIACLALPETQGRE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC LSASTDAAA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]