Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is lldD [H]

Identifier: 120612170

GI number: 120612170

Start: 3890917

End: 3892053

Strand: Reverse

Name: lldD [H]

Synonym: Aave_3519

Alternate gene names: 120612170

Gene position: 3892053-3890917 (Counterclockwise)

Preceding gene: 120612171

Following gene: 120612165

Centisome position: 72.71

GC content: 70.36

Gene sequence:

>1137_bases
ATGATCATCTCTTCCACCGCCGACTACCGCGAAGCCGCCCGCAAGCGCCTGCCGCCCTTCCTCTTCCACTACATCGACGG
CGGCGCCTATGCCGAGCAGACGCTGCGCCGCAACGTCGAGGACCTGGCCGCGGTCGCGCTGCGCCAGCGCGTGCTCAAGG
ACATGAGCCGCCTCGACACCCGCGTCGAGCTGTTCGGCGAGCAGCTCTCCATCCCCGTGGCGCTGGCGCCCGTGGGCCTG
ACGGGCATGTTCGCGCGACGCGGCGAGGTGCAGGCCGCGCGCGCGGCCGACCGGCACGGCGTGCCGTTCACCCTGTCCAG
CGTCTCGGTCTGCCCGATCGAGGAGGTGGCACCGGAGCTCGGCCGGCCCATGTGGTTCCAGCTCTACGTGCTCAAGGACC
GCGGCTTCATGAAGAACGCGCTGGAGCGCGCCCAGGCGGCGGGATGCACGGCGCTGGTGTTCACCGTGGACATGCCCGTG
CCCGGCGCGCGCTACCGCGATGCGCATTCCGGCATGAGCGGCCCCAACGCCGCGCTGCGCCGCTACTGGCAGGCGGCCAT
GCACCCGCGCTGGGCGTGGGATGTGGGCGCGCTGGGCCGCCCGCACGACCTGGGCAACATCTCCGCCTACCTCGGCAAGC
CCACGGGCCTGGCCGACTACATGGGCTACCTGGGCGCCAATTTCGATCCCTCCATCTCGTGGAAGGACCTGGAATGGATC
CGCGCGTTCTGGAAGGGGCCCATGCTCATCAAGGGCATCCTGGACCCGGAGGACGCGAAGGACGCCGTGCGTTTCGGCGC
GGACGGCATCATCGTCTCCAACCACGGCGGCCGCCAGCTCGACGGCGTGCTCTCCTCGGCGCACGCGCTGCCGCCCATCG
CCGATGCGGTGAAGGGCCGTATCAAGATCCTGGCCGACTCGGGCATCCGCAACGGCCTGGACGTGGTGCGCACCATCGCG
CTCGGCGCCGACGCCGCGATGATCGGCCGCGCCTTCATCTACGCGCTGGCCGCGGCGGGCGAGGCCGGCGTGAAGCACGT
GCTGGAGTTGCTCGAAAAGGAAATGCGCGTGGCGATGACGCTCACCAGCGTCGCGAAGGTCTCCGACATCACGGGCGACC
TGCTGGTGAAGGCCTGA

Upstream 100 bases:

>100_bases
ATGCGCAGGGCGCACGCCAATGTACCGGCGACCACCTCGAGCACGTGCGCACCACCATCCAGCGCCTGGACGCAGACCGC
GCCCGCCGCGAGCGACAACC

Downstream 100 bases:

>100_bases
CGGCACGGGGCGGTTGCACCGCCCGGCTCAGCCCTTCGGGAGCTCCAGCGTGAAGCGCACCTGGTGATTCTCGCAATGGC
CCGTGGCGTCGCCGTGGTGG

Product: L-lactate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MIISSTADYREAARKRLPPFLFHYIDGGAYAEQTLRRNVEDLAAVALRQRVLKDMSRLDTRVELFGEQLSIPVALAPVGL
TGMFARRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPELGRPMWFQLYVLKDRGFMKNALERAQAAGCTALVFTVDMPV
PGARYRDAHSGMSGPNAALRRYWQAAMHPRWAWDVGALGRPHDLGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWI
RAFWKGPMLIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSAHALPPIADAVKGRIKILADSGIRNGLDVVRTIA
LGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTLTSVAKVSDITGDLLVKA

Sequences:

>Translated_378_residues
MIISSTADYREAARKRLPPFLFHYIDGGAYAEQTLRRNVEDLAAVALRQRVLKDMSRLDTRVELFGEQLSIPVALAPVGL
TGMFARRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPELGRPMWFQLYVLKDRGFMKNALERAQAAGCTALVFTVDMPV
PGARYRDAHSGMSGPNAALRRYWQAAMHPRWAWDVGALGRPHDLGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWI
RAFWKGPMLIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSAHALPPIADAVKGRIKILADSGIRNGLDVVRTIA
LGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTLTSVAKVSDITGDLLVKA
>Mature_378_residues
MIISSTADYREAARKRLPPFLFHYIDGGAYAEQTLRRNVEDLAAVALRQRVLKDMSRLDTRVELFGEQLSIPVALAPVGL
TGMFARRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPELGRPMWFQLYVLKDRGFMKNALERAQAAGCTALVFTVDMPV
PGARYRDAHSGMSGPNAALRRYWQAAMHPRWAWDVGALGRPHDLGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWI
RAFWKGPMLIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSAHALPPIADAVKGRIKILADSGIRNGLDVVRTIA
LGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMTLTSVAKVSDITGDLLVKA

Specific function: Unknown

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FMN hydroxy acid dehydrogenase domain [H]

Homologues:

Organism=Homo sapiens, GI11068137, Length=373, Percent_Identity=35.1206434316354, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI54234014, Length=378, Percent_Identity=35.1851851851852, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI7705393, Length=378, Percent_Identity=35.1851851851852, Blast_Score=224, Evalue=1e-58,
Organism=Escherichia coli, GI1790033, Length=377, Percent_Identity=78.5145888594164, Blast_Score=623, Evalue=1e-180,
Organism=Caenorhabditis elegans, GI193208036, Length=371, Percent_Identity=35.0404312668464, Blast_Score=230, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI32566217, Length=284, Percent_Identity=34.5070422535211, Blast_Score=169, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6323587, Length=379, Percent_Identity=27.9683377308707, Blast_Score=163, Evalue=4e-41,
Organism=Drosophila melanogaster, GI78707188, Length=379, Percent_Identity=35.6200527704486, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI281363140, Length=379, Percent_Identity=35.6200527704486, Blast_Score=214, Evalue=5e-56,
Organism=Drosophila melanogaster, GI78707190, Length=379, Percent_Identity=35.6200527704486, Blast_Score=214, Evalue=5e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR012133
- InterPro:   IPR000262
- InterPro:   IPR008259
- InterPro:   IPR020920 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =1.1.2.3 [H]

Molecular weight: Translated: 41017; Mature: 41017

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00557 FMN_HYDROXY_ACID_DH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISSTADYREAARKRLPPFLFHYIDGGAYAEQTLRRNVEDLAAVALRQRVLKDMSRLDT
CCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RVELFGEQLSIPVALAPVGLTGMFARRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPEL
HHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH
GRPMWFQLYVLKDRGFMKNALERAQAAGCTALVFTVDMPVPGARYRDAHSGMSGPNAALR
CCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCHHHHH
RYWQAAMHPRWAWDVGALGRPHDLGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWI
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
RAFWKGPMLIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSAHALPPIADAVKGR
HHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCE
IKILADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMT
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LTSVAKVSDITGDLLVKA
HHHHHHHHHCCCCCEECC
>Mature Secondary Structure
MIISSTADYREAARKRLPPFLFHYIDGGAYAEQTLRRNVEDLAAVALRQRVLKDMSRLDT
CCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RVELFGEQLSIPVALAPVGLTGMFARRGEVQAARAADRHGVPFTLSSVSVCPIEEVAPEL
HHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCHHHHHHHH
GRPMWFQLYVLKDRGFMKNALERAQAAGCTALVFTVDMPVPGARYRDAHSGMSGPNAALR
CCCEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHCCCCCCHHHHH
RYWQAAMHPRWAWDVGALGRPHDLGNISAYLGKPTGLADYMGYLGANFDPSISWKDLEWI
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHH
RAFWKGPMLIKGILDPEDAKDAVRFGADGIIVSNHGGRQLDGVLSSAHALPPIADAVKGR
HHHHCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHCCE
IKILADSGIRNGLDVVRTIALGADAAMIGRAFIYALAAAGEAGVKHVLELLEKEMRVAMT
EEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LTSVAKVSDITGDLLVKA
HHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA