Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612140
Identifier: 120612140
GI number: 120612140
Start: 3856406
End: 3857176
Strand: Reverse
Name: 120612140
Synonym: Aave_3489
Alternate gene names: NA
Gene position: 3857176-3856406 (Counterclockwise)
Preceding gene: 120612141
Following gene: 120612139
Centisome position: 72.06
GC content: 73.54
Gene sequence:
>771_bases ATGGGCGTTCTGATGCACCTGTCCGATCTGCACTTCGGCGCGCACGATCCGTGCGTCTGCGCGGCGGTGCAGAAGCTCGC GCGCGCGCTGCCGGTGTCGGTCCTCGTGGTGTCGGGCGACCTCACGCAGCGCGCCACCGCGGCGCAGTTCGACGCCGCGC ACGACTTCATTGCCGCGCTGCCGGCACGCCACACCCTGGTCATGCCGGGCAACCACGACCTGCCCCTGTTCGCATGGTGG GAGCGGATCGGCGGCGCCTACCGGCGCTACGCCCGCTGGTGGGGGGACGACCGGGAGCCCGTGTGCGACGCCGGCGGGTT CTTCGTGGTGGGCGTCGATACCACGCGTCCGTGGCGCCACCGCCGCGCCAGCCTCTCGCGCGGGCAGATCGACCGCGCGG CGCTGAGGCTGGCCGGCGCGCCGCCGGACCGCTGGCGCATCGTTGCCTCGCACCACCCCCTGGTGGCCCGGCATCCGGGA GATGCCGACCACCGCCCCCACCATGCCGCCGAGGCGCTGGCGCGCTGGCGGGCCGCCGGTGCCGAACTGCTGCTGTCCGG CCACGCCCATGCGCCAGGTCTGGTCGAGGCGCTGCCGGGGCTGCGGGCCGCGCAGGCCGGCACGGCCGTGTCCGTGCGGC TGCGGGCGGAAGCACCCAACAGCCTGCTGACCCTGCGGGCCGGTCCGCAGGGCAGGCAACTGACGCGCTGGGATTTCGAC CGGGAACGGGGAGAATTCGTTCCGGATAATCCTGTCAGCTGGAATTTCTGA
Upstream 100 bases:
>100_bases GGGAGGCGCCCCCCCCGGGCGTTGCCCCCCTGCCGGGCGCGGTGCCAGGCATGGCCGCGGCCATCTCCTGAGAGCCTGCG CATCAGCGGGGGCGGTGGCC
Downstream 100 bases:
>100_bases CATCCCGCTCCCCTGGAAGGGCTGGGAGAGCGTTTCCCGGCATTTGTCAAAGGCATCCAAAATGGTAAAAACCGGTGCTA CTGGGAGGGCCCTTACTTGG
Product: metallophosphoesterase
Products: NA
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; DNA Repair Exonuclease; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase CpdA-Like Protein; Metallo-Phosphoesterase; Calcineurin-Like Phosphoesterase Family; Transcriptional Regulator Icc Related Protein; Metallophosphoesterase Protein; Phosphodiesterase
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MGVLMHLSDLHFGAHDPCVCAAVQKLARALPVSVLVVSGDLTQRATAAQFDAAHDFIAALPARHTLVMPGNHDLPLFAWW ERIGGAYRRYARWWGDDREPVCDAGGFFVVGVDTTRPWRHRRASLSRGQIDRAALRLAGAPPDRWRIVASHHPLVARHPG DADHRPHHAAEALARWRAAGAELLLSGHAHAPGLVEALPGLRAAQAGTAVSVRLRAEAPNSLLTLRAGPQGRQLTRWDFD RERGEFVPDNPVSWNF
Sequences:
>Translated_256_residues MGVLMHLSDLHFGAHDPCVCAAVQKLARALPVSVLVVSGDLTQRATAAQFDAAHDFIAALPARHTLVMPGNHDLPLFAWW ERIGGAYRRYARWWGDDREPVCDAGGFFVVGVDTTRPWRHRRASLSRGQIDRAALRLAGAPPDRWRIVASHHPLVARHPG DADHRPHHAAEALARWRAAGAELLLSGHAHAPGLVEALPGLRAAQAGTAVSVRLRAEAPNSLLTLRAGPQGRQLTRWDFD RERGEFVPDNPVSWNF >Mature_255_residues GVLMHLSDLHFGAHDPCVCAAVQKLARALPVSVLVVSGDLTQRATAAQFDAAHDFIAALPARHTLVMPGNHDLPLFAWWE RIGGAYRRYARWWGDDREPVCDAGGFFVVGVDTTRPWRHRRASLSRGQIDRAALRLAGAPPDRWRIVASHHPLVARHPGD ADHRPHHAAEALARWRAAGAELLLSGHAHAPGLVEALPGLRAAQAGTAVSVRLRAEAPNSLLTLRAGPQGRQLTRWDFDR ERGEFVPDNPVSWNF
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28108; Mature: 27977
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLMHLSDLHFGAHDPCVCAAVQKLARALPVSVLVVSGDLTQRATAAQFDAAHDFIAAL CCEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHC PARHTLVMPGNHDLPLFAWWERIGGAYRRYARWWGDDREPVCDAGGFFVVGVDTTRPWRH CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHH RRASLSRGQIDRAALRLAGAPPDRWRIVASHHPLVARHPGDADHRPHHAAEALARWRAAG HHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCC AELLLSGHAHAPGLVEALPGLRAAQAGTAVSVRLRAEAPNSLLTLRAGPQGRQLTRWDFD HHEEEECCCCCCHHHHHCCCCHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCC RERGEFVPDNPVSWNF CCCCCCCCCCCCCCCC >Mature Secondary Structure GVLMHLSDLHFGAHDPCVCAAVQKLARALPVSVLVVSGDLTQRATAAQFDAAHDFIAAL CEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHC PARHTLVMPGNHDLPLFAWWERIGGAYRRYARWWGDDREPVCDAGGFFVVGVDTTRPWRH CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHH RRASLSRGQIDRAALRLAGAPPDRWRIVASHHPLVARHPGDADHRPHHAAEALARWRAAG HHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHCC AELLLSGHAHAPGLVEALPGLRAAQAGTAVSVRLRAEAPNSLLTLRAGPQGRQLTRWDFD HHEEEECCCCCCHHHHHCCCCHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCC RERGEFVPDNPVSWNF CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA