Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is yegS [C]
Identifier: 120612141
GI number: 120612141
Start: 3857206
End: 3858324
Strand: Reverse
Name: yegS [C]
Synonym: Aave_3490
Alternate gene names: 120612141
Gene position: 3858324-3857206 (Counterclockwise)
Preceding gene: 120612143
Following gene: 120612140
Centisome position: 72.08
GC content: 75.34
Gene sequence:
>1119_bases ATGCCCACCTCCGTTCCGACATCCTCTCCCGCCGCGCCCGGACCCGGGCCCGTGCATCTGGTGGTGCCGCACCGGCCGGG CGCGGACCACCACCAGCTGCGGGGCCGGCTGGAGGCCCTCGAACCACTGCGCCGCCACGCGGTGCAGTGGCACGTGCCGG CAGTGCGCGCCGGCATCGTGCAGGCGGCCGACGAAGCGGCGCGGGCCGCGCGGGCCTCGGGCGGCATCGTCGTGGCCTGC GGCGGCGACGGCACCATCAATGCGGTGGCCGCGGCGGCCTGGCGGCACGGCGTCCGCATGGGCGTCATTCCCGCGGGCAC GTTCAACTACTTCGCGCGGGAGCAGAGCCTGTCGCTGGACCTCGCCCAGGCGGCCGAGGACATCCTGCGGGCGCTGCGCG ACGGTGACGAGCGGCCGGTGCGCGTGGGCTGGGTGAACGACAGCATGTTCCTCGTGAATGCCGCGGTCGGGCTGTATCCG CGCCTGCTCGAGCAGCGGGAGATGGCGTCCCGGCGCTTCGGCCGTTCCCGCTGGGTGGCGATCGTTTCCGCCGTCTGGAG CTTCCTGCGGCCCTCGTCGGCGCGGCGCTGGCGGGTGTCGCTGCGCGCCCACCGCGGCGCGGACACGCTGGTGCAGGAGG AGTTCTTCGCCTCCACGCTGTTCGTCGGCAACAACCCGCTGCAGCTCGGGCGGCTGGGCATTCCCCAGGCGCGCGACGTG GCCGAAGGGGACCACCTCGCGGTACTGCTGCTCAAGCCGCAGGGCCGCTGGGCCACCGCCCGCACGGTCTGGCATGCCGC CATCGGCCAGCTCGACCGCGACGCAGCCGTCATCAGCCTGGCCTGCTCCGAGATGGTGGTGGAGCCCGCCAGCTGGCGCC CCGTCCAGGTCAAGGTGGCGTTCGACGGCGAGCGCGCCTGGATGCCGCCGCCGCTGCGCTTTCGCGTGGAAGACCGGCCG CTGTGGCTCGTGGCCCCCACGGCGACGGCCAGGGACGAGGAGGGCGCCATGCGCCCGGCCCTCGCTCCCGAGCCGGAAGC CGACCCCGGGGAGGCGCCCCCCCCGGGCGTTGCCCCCCTGCCGGGCGCGGTGCCAGGCATGGCCGCGGCCATCTCCTGA
Upstream 100 bases:
>100_bases CGTTCCCTGCCGGCCATGCGGGCATTGCCTGCCGGCCGTTTCCGCGTTGCCTTTCCTGTGCCTCGGCCGCCCACGGCCGC GCCTTTCCGCCCACCGCACC
Downstream 100 bases:
>100_bases GAGCCTGCGCATCAGCGGGGGCGGTGGCCATGGGCGTTCTGATGCACCTGTCCGATCTGCACTTCGGCGCGCACGATCCG TGCGTCTGCGCGGCGGTGCA
Product: diacylglycerol kinase catalytic subunit
Products: NA
Alternate protein names: Diacylglycerol Kinase; Sphingosine Kinase; Diacylglycerol Kinase Catalytic Domain-Containing Protein; Sphingosine Kinase And Related Diacylglycerol Kinase; PA-Phosphatase-Like Phosphoesterase; Diacylglycerol Kinase Catalytic Subunit; Related Diacylglycerol Kinase; Lipid Kinase; Sphingosine Kinase And; Sphingosine Kinase-Like Protein; Diacylglycerol Kinase-Like Protein; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Protein; Sphingosine Kinase/Eukaryotic Diacylglycerol Kinase; Diacylglycerol Kinase Catalytic Domain Protein; Diacylglycerol Kinase Protein
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPTSVPTSSPAAPGPGPVHLVVPHRPGADHHQLRGRLEALEPLRRHAVQWHVPAVRAGIVQAADEAARAARASGGIVVAC GGDGTINAVAAAAWRHGVRMGVIPAGTFNYFAREQSLSLDLAQAAEDILRALRDGDERPVRVGWVNDSMFLVNAAVGLYP RLLEQREMASRRFGRSRWVAIVSAVWSFLRPSSARRWRVSLRAHRGADTLVQEEFFASTLFVGNNPLQLGRLGIPQARDV AEGDHLAVLLLKPQGRWATARTVWHAAIGQLDRDAAVISLACSEMVVEPASWRPVQVKVAFDGERAWMPPPLRFRVEDRP LWLVAPTATARDEEGAMRPALAPEPEADPGEAPPPGVAPLPGAVPGMAAAIS
Sequences:
>Translated_372_residues MPTSVPTSSPAAPGPGPVHLVVPHRPGADHHQLRGRLEALEPLRRHAVQWHVPAVRAGIVQAADEAARAARASGGIVVAC GGDGTINAVAAAAWRHGVRMGVIPAGTFNYFAREQSLSLDLAQAAEDILRALRDGDERPVRVGWVNDSMFLVNAAVGLYP RLLEQREMASRRFGRSRWVAIVSAVWSFLRPSSARRWRVSLRAHRGADTLVQEEFFASTLFVGNNPLQLGRLGIPQARDV AEGDHLAVLLLKPQGRWATARTVWHAAIGQLDRDAAVISLACSEMVVEPASWRPVQVKVAFDGERAWMPPPLRFRVEDRP LWLVAPTATARDEEGAMRPALAPEPEADPGEAPPPGVAPLPGAVPGMAAAIS >Mature_371_residues PTSVPTSSPAAPGPGPVHLVVPHRPGADHHQLRGRLEALEPLRRHAVQWHVPAVRAGIVQAADEAARAARASGGIVVACG GDGTINAVAAAAWRHGVRMGVIPAGTFNYFAREQSLSLDLAQAAEDILRALRDGDERPVRVGWVNDSMFLVNAAVGLYPR LLEQREMASRRFGRSRWVAIVSAVWSFLRPSSARRWRVSLRAHRGADTLVQEEFFASTLFVGNNPLQLGRLGIPQARDVA EGDHLAVLLLKPQGRWATARTVWHAAIGQLDRDAAVISLACSEMVVEPASWRPVQVKVAFDGERAWMPPPLRFRVEDRPL WLVAPTATARDEEGAMRPALAPEPEADPGEAPPPGVAPLPGAVPGMAAAIS
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40036; Mature: 39905
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSVPTSSPAAPGPGPVHLVVPHRPGADHHQLRGRLEALEPLRRHAVQWHVPAVRAGIV CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHH QAADEAARAARASGGIVVACGGDGTINAVAAAAWRHGVRMGVIPAGTFNYFAREQSLSLD HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCHH LAQAAEDILRALRDGDERPVRVGWVNDSMFLVNAAVGLYPRLLEQREMASRRFGRSRWVA HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH IVSAVWSFLRPSSARRWRVSLRAHRGADTLVQEEFFASTLFVGNNPLQLGRLGIPQARDV HHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHEEEEECCCCCEECCCCCCCCCCC AEGDHLAVLLLKPQGRWATARTVWHAAIGQLDRDAAVISLACSEMVVEPASWRPVQVKVA CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE FDGERAWMPPPLRFRVEDRPLWLVAPTATARDEEGAMRPALAPEPEADPGEAPPPGVAPL ECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAVPGMAAAIS CCCCCCHHHHCC >Mature Secondary Structure PTSVPTSSPAAPGPGPVHLVVPHRPGADHHQLRGRLEALEPLRRHAVQWHVPAVRAGIV CCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHH QAADEAARAARASGGIVVACGGDGTINAVAAAAWRHGVRMGVIPAGTFNYFAREQSLSLD HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCHH LAQAAEDILRALRDGDERPVRVGWVNDSMFLVNAAVGLYPRLLEQREMASRRFGRSRWVA HHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH IVSAVWSFLRPSSARRWRVSLRAHRGADTLVQEEFFASTLFVGNNPLQLGRLGIPQARDV HHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHEEEEECCCCCEECCCCCCCCCCC AEGDHLAVLLLKPQGRWATARTVWHAAIGQLDRDAAVISLACSEMVVEPASWRPVQVKVA CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE FDGERAWMPPPLRFRVEDRPLWLVAPTATARDEEGAMRPALAPEPEADPGEAPPPGVAPL ECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGAVPGMAAAIS CCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA