Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612136
Identifier: 120612136
GI number: 120612136
Start: 3849525
End: 3849974
Strand: Reverse
Name: 120612136
Synonym: Aave_3485
Alternate gene names: NA
Gene position: 3849974-3849525 (Counterclockwise)
Preceding gene: 120612137
Following gene: 120612133
Centisome position: 71.92
GC content: 74.0
Gene sequence:
>450_bases ATGGCACAAGCGCAGGCTGTTTCCATCCCGGCGGACGACGCCGCGCCACGTGCCGATGCGGGTGCGGCGCCGGTGATGCG CACCGGCCGTGTCACAGGGGCGCTGGGCCCGGACCGCTATGCCGTGGAGTACCCCGGAGCGGGGGCGGACATGGCCCCCA GCGCCTCCGTGGGCGTGCTCCTGCCGGAACTCGTTCCCGGCGACGAGGTGCTGCTGGCGGTGCGCTCCGGCGGCGAGGCC GTCATCACCGCGGTGCTGGCCCCCTCGCCCGCCGTGCCGTGGAACCAGCGGGCCATCCGCCTGCAGTCGCAGGACGCCGT GGTGCTGTCGTGCGGCGAGGCGTCCCTGCGCCTGACGGGCCAGGGTCTCGCGCGCCTCGTGGCCCTGAAGATCGAGCACG ACGCGCGCGACCTCGTGGACATCGATGCGGCCGAGGTCCGCATCAACTGA
Upstream 100 bases:
>100_bases AGACGATTTCCATCGCGGGCAGCTCCAAGGTGACGGTCTCGTCGCCGGACAGCCACGTCAATCCTGCGTGAGGCGGGAAA AACAGGAGAGGAGGGTTCCG
Downstream 100 bases:
>100_bases GCGCCCGTCAGAGATGCACCTGCAGGCTTTCCAGGTACCGGGCGGCTTCCCTGTCGAACGTGTGGCGCCAGACCACCACC ATGTGGCCGTGCTCGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAQAQAVSIPADDAAPRADAGAAPVMRTGRVTGALGPDRYAVEYPGAGADMAPSASVGVLLPELVPGDEVLLAVRSGGEA VITAVLAPSPAVPWNQRAIRLQSQDAVVLSCGEASLRLTGQGLARLVALKIEHDARDLVDIDAAEVRIN
Sequences:
>Translated_149_residues MAQAQAVSIPADDAAPRADAGAAPVMRTGRVTGALGPDRYAVEYPGAGADMAPSASVGVLLPELVPGDEVLLAVRSGGEA VITAVLAPSPAVPWNQRAIRLQSQDAVVLSCGEASLRLTGQGLARLVALKIEHDARDLVDIDAAEVRIN >Mature_148_residues AQAQAVSIPADDAAPRADAGAAPVMRTGRVTGALGPDRYAVEYPGAGADMAPSASVGVLLPELVPGDEVLLAVRSGGEAV ITAVLAPSPAVPWNQRAIRLQSQDAVVLSCGEASLRLTGQGLARLVALKIEHDARDLVDIDAAEVRIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15211; Mature: 15080
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQAQAVSIPADDAAPRADAGAAPVMRTGRVTGALGPDRYAVEYPGAGADMAPSASVGVL CCCCCEEECCCCCCCCCCCCCCCCCEECCCEEECCCCCCEEEECCCCCCCCCCCCCCEEE LPELVPGDEVLLAVRSGGEAVITAVLAPSPAVPWNQRAIRLQSQDAVVLSCGEASLRLTG ECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEC QGLARLVALKIEHDARDLVDIDAAEVRIN CCCEEEEEEEECCCCCCEEECCCEEEEEC >Mature Secondary Structure AQAQAVSIPADDAAPRADAGAAPVMRTGRVTGALGPDRYAVEYPGAGADMAPSASVGVL CCCCEEECCCCCCCCCCCCCCCCCEECCCEEECCCCCCEEEECCCCCCCCCCCCCCEEE LPELVPGDEVLLAVRSGGEAVITAVLAPSPAVPWNQRAIRLQSQDAVVLSCGEASLRLTG ECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCEEEEEC QGLARLVALKIEHDARDLVDIDAAEVRIN CCCEEEEEEEECCCCCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA