Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612133
Identifier: 120612133
GI number: 120612133
Start: 3846043
End: 3847164
Strand: Reverse
Name: 120612133
Synonym: Aave_3482
Alternate gene names: NA
Gene position: 3847164-3846043 (Counterclockwise)
Preceding gene: 120612136
Following gene: 120612132
Centisome position: 71.87
GC content: 76.38
Gene sequence:
>1122_bases ATGACGCCTCTTTCCATCGCCGCCACCGGCGCCTGCTCCCCCATCGGCACCCGCGCCTGGCAGACCGCTTCCAGCCTCGC CGCGGGCCTGTCCGCCTTCACCCGGCAGGCCATCGCCGGCCAGGCCGACCACCGCGCCACGGTTTCGCGCGTGCCAGGCA TCGACCCGGCCTGCACCGGCACGGAGCGCCTCGTGCGCCTGGCCGCCCCGGCGCTGCACGAGGCCCTGCGCTCCGGGCCG GCGCCCGCCACGGGCTGGCCCCTGCGGCGGCCGATCCCGCTGTTCGTGGCACTGCCCGAGCCCTGGGCGGAACTGCCCGG CGGCATCGACACCGACCGCTTCGCGCTGGAACTGCCGCGCGCCCTGGACCTCGCCCCCGAATTCCTGCCCCTGACCCTGT ATGCGGGCGGCGCGGTGGGCGGCGCCGATGCGCTGGCCGGCGCCTACCGGTTCATGCAGGCGCACCCCGACGTGCCCGAA GTGCTCGTGGGCGGCGTGGACAGCCTCGCCGACCCGGCCGTGGTGGAGGCGCTCTACCAGCGCCGCTGGGTGCAGGTGGC CGGCCATTGCGAAGGCTTCGTCGCCTCCGAGGCCGCCGCCTTCGTGCGCCTGACCCGCATGCCCGCGGCCGGCGAATTCG CCACCGTCTATCCGCCGGCCTTCGGCGAGGAAGCCGCCCCGCGCGTGGGCGAGGCGTCGCTGCTGGACGGCCGCGCGCTG ATCCAGTCTGCCCGCGCCGCGCTGCAGACCGCGCGCATGCCTGCCGATGCGCTGCATTCGTATTGGTCGGACATGGACGA CTCCCCCTGGCGCGGGGCCGAGCGGGCCAGCCTGTCGGCGGCCTTCGCCGCCGACGGGGGGCTTGCCCCCGCGCGCGATC CGGCCGCCTTCCTGGGCGAGGTCGGCGCCGCGTGGGTGCCCCTCATGCTCTCGCTCTTCCATGAAATGCGCCAGGCGCTG TCCCACCCCGTCATGCCCGCGCGCCTCGCGGGCCATGCGGGCCTGCAGACCGTCACCGGCCTGTCCACGCGCACCGCCGC CTGGGTCGCCACCTGGGACCATGCGCAGCCGGCGCGCCCGGCGGCGGGCGCCGGCCGCGGAGCCCTCCCGATTCCTTCCT GA
Upstream 100 bases:
>100_bases TCTGGATCGAAGCCGACGACCTGATGCCCGTGCAGGGCCTGGCAGCGGCCACGGCCTCGGTCCTGGAACGGGCGGCCTTC GGCGCCGCGCAGCCCCAGCC
Downstream 100 bases:
>100_bases GCAGAGACATGGCCACGTTCGTCAACGACCGCAGAGCGATCCACGAAGGCCGCAGCCCGGCGATGATCCCGGGCCCGGTG AACCCCGTGTTCCCCAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MTPLSIAATGACSPIGTRAWQTASSLAAGLSAFTRQAIAGQADHRATVSRVPGIDPACTGTERLVRLAAPALHEALRSGP APATGWPLRRPIPLFVALPEPWAELPGGIDTDRFALELPRALDLAPEFLPLTLYAGGAVGGADALAGAYRFMQAHPDVPE VLVGGVDSLADPAVVEALYQRRWVQVAGHCEGFVASEAAAFVRLTRMPAAGEFATVYPPAFGEEAAPRVGEASLLDGRAL IQSARAALQTARMPADALHSYWSDMDDSPWRGAERASLSAAFAADGGLAPARDPAAFLGEVGAAWVPLMLSLFHEMRQAL SHPVMPARLAGHAGLQTVTGLSTRTAAWVATWDHAQPARPAAGAGRGALPIPS
Sequences:
>Translated_373_residues MTPLSIAATGACSPIGTRAWQTASSLAAGLSAFTRQAIAGQADHRATVSRVPGIDPACTGTERLVRLAAPALHEALRSGP APATGWPLRRPIPLFVALPEPWAELPGGIDTDRFALELPRALDLAPEFLPLTLYAGGAVGGADALAGAYRFMQAHPDVPE VLVGGVDSLADPAVVEALYQRRWVQVAGHCEGFVASEAAAFVRLTRMPAAGEFATVYPPAFGEEAAPRVGEASLLDGRAL IQSARAALQTARMPADALHSYWSDMDDSPWRGAERASLSAAFAADGGLAPARDPAAFLGEVGAAWVPLMLSLFHEMRQAL SHPVMPARLAGHAGLQTVTGLSTRTAAWVATWDHAQPARPAAGAGRGALPIPS >Mature_372_residues TPLSIAATGACSPIGTRAWQTASSLAAGLSAFTRQAIAGQADHRATVSRVPGIDPACTGTERLVRLAAPALHEALRSGPA PATGWPLRRPIPLFVALPEPWAELPGGIDTDRFALELPRALDLAPEFLPLTLYAGGAVGGADALAGAYRFMQAHPDVPEV LVGGVDSLADPAVVEALYQRRWVQVAGHCEGFVASEAAAFVRLTRMPAAGEFATVYPPAFGEEAAPRVGEASLLDGRALI QSARAALQTARMPADALHSYWSDMDDSPWRGAERASLSAAFAADGGLAPARDPAAFLGEVGAAWVPLMLSLFHEMRQALS HPVMPARLAGHAGLQTVTGLSTRTAAWVATWDHAQPARPAAGAGRGALPIPS
Specific function: Unknown
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38751; Mature: 38620
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLSIAATGACSPIGTRAWQTASSLAAGLSAFTRQAIAGQADHRATVSRVPGIDPACTG CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH TERLVRLAAPALHEALRSGPAPATGWPLRRPIPLFVALPEPWAELPGGIDTDRFALELPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHCCH ALDLAPEFLPLTLYAGGAVGGADALAGAYRFMQAHPDVPEVLVGGVDSLADPAVVEALYQ HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHH RRWVQVAGHCEGFVASEAAAFVRLTRMPAAGEFATVYPPAFGEEAAPRVGEASLLDGRAL HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH IQSARAALQTARMPADALHSYWSDMDDSPWRGAERASLSAAFAADGGLAPARDPAAFLGE HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH VGAAWVPLMLSLFHEMRQALSHPVMPARLAGHAGLQTVTGLSTRTAAWVATWDHAQPARP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCHHHEEEEEECCCCCCCCC AAGAGRGALPIPS CCCCCCCCCCCCC >Mature Secondary Structure TPLSIAATGACSPIGTRAWQTASSLAAGLSAFTRQAIAGQADHRATVSRVPGIDPACTG CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH TERLVRLAAPALHEALRSGPAPATGWPLRRPIPLFVALPEPWAELPGGIDTDRFALELPR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCHHHHHCCH ALDLAPEFLPLTLYAGGAVGGADALAGAYRFMQAHPDVPEVLVGGVDSLADPAVVEALYQ HHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHCCHHHHHHHHH RRWVQVAGHCEGFVASEAAAFVRLTRMPAAGEFATVYPPAFGEEAAPRVGEASLLDGRAL HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHH IQSARAALQTARMPADALHSYWSDMDDSPWRGAERASLSAAFAADGGLAPARDPAAFLGE HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH VGAAWVPLMLSLFHEMRQALSHPVMPARLAGHAGLQTVTGLSTRTAAWVATWDHAQPARP HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHCCCHHHEEEEEECCCCCCCCC AAGAGRGALPIPS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA