Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612119
Identifier: 120612119
GI number: 120612119
Start: 3830172
End: 3830801
Strand: Direct
Name: 120612119
Synonym: Aave_3466
Alternate gene names: NA
Gene position: 3830172-3830801 (Clockwise)
Preceding gene: 120612117
Following gene: 120612122
Centisome position: 71.55
GC content: 70.16
Gene sequence:
>630_bases ATGCACACGAAAAGGCAAACGCAAAGGCACACCTACCGCCTCTCCGAGGGCCACGGGCTCGCGCACGATCCGATTCCGGC GATCCTGGGGCCCCGGCCCATCGGGTGGATCTCCACGCGCTCGGCCGGCGGCCGGGCCAACCTCGCGCCCTACAGCTTTT TCAACATCTTCAACTACCGCCCGCCCATCGTGGCGTTCTCCAGCGTCGGGCACAAGGACACGGTGCGCAATGCAGAGGAG ACGGGCGAGTTCGTGTGCAACCTGGCCACGCGCCCGCTGGCGGAACAGGTGAACCTGAGCAGCACCGAGTTGCCTGGCGC CGACGAGTTCGCGCTCACCGGCCTCACGCCAGCGCCCTGCCTGGAAGTGGCGGCCCCGCACGTGGCGGAGAGCCCGGTGG CCCTGGAATGCCGGGTGACGCAGGTCCAGCGCCTGGCCGGGCTGGACGGCGAGCCGCTCGGCACCTGGATGGTGTTCGGC CAGGTGGTGGCGGTGCAGATCGACCGCGCGCTGCTGCACGGCGGCATCTACGACACGGCTGCGGCGCAGCCCATCCTGCG CGCGGGCGGTCCGCAGGACTATTTCCAGATCCTGCCCGAGGGACTGCTGCGCATGGCGCGGCCCCGGTAG
Upstream 100 bases:
>100_bases TATCCGCCGCCTGCGGATCTCTGCGCCGCGCCGCGCTCCCGCGGGCGGTCCGGCGCCAGAATGGCCGGGACCTCCCCTCC GCCACGACGCCACTTACCGC
Downstream 100 bases:
>100_bases CACGGCGGAGCCGCTGTGCCAGCCGTGCCAGCCGCTTCTTATCCCGAGCGACTCACACGCCCCAGGGACGCGGTTCCGGC GGGGCACCGCATCGCACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MHTKRQTQRHTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYRPPIVAFSSVGHKDTVRNAEE TGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPCLEVAAPHVAESPVALECRVTQVQRLAGLDGEPLGTWMVFG QVVAVQIDRALLHGGIYDTAAAQPILRAGGPQDYFQILPEGLLRMARPR
Sequences:
>Translated_209_residues MHTKRQTQRHTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYRPPIVAFSSVGHKDTVRNAEE TGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPCLEVAAPHVAESPVALECRVTQVQRLAGLDGEPLGTWMVFG QVVAVQIDRALLHGGIYDTAAAQPILRAGGPQDYFQILPEGLLRMARPR >Mature_209_residues MHTKRQTQRHTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYRPPIVAFSSVGHKDTVRNAEE TGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPCLEVAAPHVAESPVALECRVTQVQRLAGLDGEPLGTWMVFG QVVAVQIDRALLHGGIYDTAAAQPILRAGGPQDYFQILPEGLLRMARPR
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 22655; Mature: 22655
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTKRQTQRHTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYR CCCCHHHHHHHEEECCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCC PPIVAFSSVGHKDTVRNAEETGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPC CCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCH LEVAAPHVAESPVALECRVTQVQRLAGLDGEPLGTWMVFGQVVAVQIDRALLHGGIYDTA HHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH AAQPILRAGGPQDYFQILPEGLLRMARPR HHCHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHTKRQTQRHTYRLSEGHGLAHDPIPAILGPRPIGWISTRSAGGRANLAPYSFFNIFNYR CCCCHHHHHHHEEECCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCC PPIVAFSSVGHKDTVRNAEETGEFVCNLATRPLAEQVNLSSTELPGADEFALTGLTPAPC CCEEEECCCCCHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEECCCCCCCH LEVAAPHVAESPVALECRVTQVQRLAGLDGEPLGTWMVFGQVVAVQIDRALLHGGIYDTA HHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH AAQPILRAGGPQDYFQILPEGLLRMARPR HHCHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]