Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yyaM [H]

Identifier: 120612122

GI number: 120612122

Start: 3833186

End: 3834088

Strand: Direct

Name: yyaM [H]

Synonym: Aave_3469

Alternate gene names: 120612122

Gene position: 3833186-3834088 (Clockwise)

Preceding gene: 120612119

Following gene: 120612134

Centisome position: 71.61

GC content: 72.87

Gene sequence:

>903_bases
ATGACACAACGACTCTCGTCCGGCACCGCGGCCCTGCTCGTGGCCGCGCCGCTGCTCTGGGCCGGCAACGCGGTCGTCGG
CCGCCTCGTGCATCCCCTCATCTCCCCGGTCGCGCTCAACTTCATCCGCTGGGCGCTGGCCTTCCTCGTGCTGCTGCCCC
TGGCCCACGGCGTGCTGCGCCGCGGCAGCCCGCTGTGGCCGCACTGGCGCCGCTACGCGATGCTCGGGCTGCTGGGCATC
GGCTGCTACAACGCGCTGCAGTACATGGCGCTGCAGACCTCCACGCCGCTCAACGTCACGCTCGTGGGCTCCGGCCTGCC
GGTCTGGATGCTGGCCATCGGCACGCTCTGCTTCGGGGCCCGGGTGACGCGCGCGCAGGCGACGGGTGCGCTGCTCTCCA
TCGCCGGCGTGCTGGTGGTGCTCAGCCGCGGCGAATGGGCGCAGCTGCTGGCGCTGCGGCTCGTGCCGGGCGATCTCTAC
ATGGTGCTGGCCACCATCTCCTGGGCCTTCTACAGCTGGCTGCTGTCGCGCACCACCGAACCCGTGGGCCTGCGCGGCGA
CTGGGCCGCCTTCCTCATGGCGCAGATGGTGTTCGGCCTGGCCTGGTCCGGCGCGTTCGCCGCCGGCGAATGGACGCTCG
GCCACGCCCACGCCACCTGGGGCTGGCCGCTCGTGGCCGCCCTCGCCTTCATCGCGCTCGGCCCCGCCCTGCTCGCCTAC
CGCTGCTGGGGCGTGGGCGTGCAGCGCGCCGGCCCGGCCGTGGCGAGTTTCTTCATCAACCTCACGCCACTCTTCGCCGC
CGTGCTCTCCGCCCTGGTACTGGGCGAGACGCCCCACCTCTACCACGGCGCGGCGTTCGCGCTGATCGTGGCGGGGATCG
TGGTGTCGTCGCGGCGGGGGTAA

Upstream 100 bases:

>100_bases
ATGCGGACGGGCATCCGGCCCGCGGAATGGCCCCACGCGGGGGCCGGCGTGCATCCTGCCACGGATCGGCGAAGCCCGCA
GGCCGGTACATTTCCAGGCC

Downstream 100 bases:

>100_bases
GAAACTCTTGCTCCAGTCAGGCGAAGACCAGCAGCAGCGCTCCTGACAACATCAGAACGGCGGGCAGCCACCGCTCCCGC
ATGCGGGTGGCCTTTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTQRLSSGTAALLVAAPLLWAGNAVVGRLVHPLISPVALNFIRWALAFLVLLPLAHGVLRRGSPLWPHWRRYAMLGLLGI
GCYNALQYMALQTSTPLNVTLVGSGLPVWMLAIGTLCFGARVTRAQATGALLSIAGVLVVLSRGEWAQLLALRLVPGDLY
MVLATISWAFYSWLLSRTTEPVGLRGDWAAFLMAQMVFGLAWSGAFAAGEWTLGHAHATWGWPLVAALAFIALGPALLAY
RCWGVGVQRAGPAVASFFINLTPLFAAVLSALVLGETPHLYHGAAFALIVAGIVVSSRRG

Sequences:

>Translated_300_residues
MTQRLSSGTAALLVAAPLLWAGNAVVGRLVHPLISPVALNFIRWALAFLVLLPLAHGVLRRGSPLWPHWRRYAMLGLLGI
GCYNALQYMALQTSTPLNVTLVGSGLPVWMLAIGTLCFGARVTRAQATGALLSIAGVLVVLSRGEWAQLLALRLVPGDLY
MVLATISWAFYSWLLSRTTEPVGLRGDWAAFLMAQMVFGLAWSGAFAAGEWTLGHAHATWGWPLVAALAFIALGPALLAY
RCWGVGVQRAGPAVASFFINLTPLFAAVLSALVLGETPHLYHGAAFALIVAGIVVSSRRG
>Mature_299_residues
TQRLSSGTAALLVAAPLLWAGNAVVGRLVHPLISPVALNFIRWALAFLVLLPLAHGVLRRGSPLWPHWRRYAMLGLLGIG
CYNALQYMALQTSTPLNVTLVGSGLPVWMLAIGTLCFGARVTRAQATGALLSIAGVLVVLSRGEWAQLLALRLVPGDLYM
VLATISWAFYSWLLSRTTEPVGLRGDWAAFLMAQMVFGLAWSGAFAAGEWTLGHAHATWGWPLVAALAFIALGPALLAYR
CWGVGVQRAGPAVASFFINLTPLFAAVLSALVLGETPHLYHGAAFALIVAGIVVSSRRG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31943; Mature: 31812

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS00399 SUCCINYL_COA_LIG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRLSSGTAALLVAAPLLWAGNAVVGRLVHPLISPVALNFIRWALAFLVLLPLAHGVLR
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSPLWPHWRRYAMLGLLGIGCYNALQYMALQTSTPLNVTLVGSGLPVWMLAIGTLCFGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
RVTRAQATGALLSIAGVLVVLSRGEWAQLLALRLVPGDLYMVLATISWAFYSWLLSRTTE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PVGLRGDWAAFLMAQMVFGLAWSGAFAAGEWTLGHAHATWGWPLVAALAFIALGPALLAY
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
RCWGVGVQRAGPAVASFFINLTPLFAAVLSALVLGETPHLYHGAAFALIVAGIVVSSRRG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQRLSSGTAALLVAAPLLWAGNAVVGRLVHPLISPVALNFIRWALAFLVLLPLAHGVLR
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGSPLWPHWRRYAMLGLLGIGCYNALQYMALQTSTPLNVTLVGSGLPVWMLAIGTLCFGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
RVTRAQATGALLSIAGVLVVLSRGEWAQLLALRLVPGDLYMVLATISWAFYSWLLSRTTE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PVGLRGDWAAFLMAQMVFGLAWSGAFAAGEWTLGHAHATWGWPLVAALAFIALGPALLAY
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
RCWGVGVQRAGPAVASFFINLTPLFAAVLSALVLGETPHLYHGAAFALIVAGIVVSSRRG
HHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]