Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is icc [C]
Identifier: 120612111
GI number: 120612111
Start: 3820773
End: 3821630
Strand: Direct
Name: icc [C]
Synonym: Aave_3458
Alternate gene names: 120612111
Gene position: 3820773-3821630 (Clockwise)
Preceding gene: 120612110
Following gene: 120612114
Centisome position: 71.38
GC content: 72.49
Gene sequence:
>858_bases ATGACCCGCTCCATGACCGCATCCACCGCACCCACCACCCTTTTGCTGCAGCTCTCCGACCTGCACATCCGCGAGCCCGG CCGCCTGGCCTACGGCCGGCTGGACACCGCTCCCTACCTGCGCCAGGCAGTGGAGACGGTGCTGCGCATGCCGCAGCGCC CCGACGCCATCGTCGCCACGGGCGACCTCACGGATTTCGGGCGGCCCGAAGAGTACGGCCACCTGCGCAAGCTGCTCGCG CCGCTGGGCGCGATACCGCTCTACCTGCTGCCCGGCAACCACGACGACCGCGCGCAGCTGCGCGCCAGCTTCCCGGGCCA CGGCTACCTGGGCACGGACGGCTTCGTGCAATTCAGCGTGTCCGTGGGCGGCCTGCAGCTCATCGCGCTGGACACCGTGG TGCCCGGCGCGAGCGAGGGCAGTCTCTGCGCCGAGCGCCTGGAATGGCTGGCCGCGCAGCTCGATGCCAGCAGGGGCCGG CCGGTGGTCATCGCCATGCACCATCCGCCCTTCCGCACGCTGATCGGCCACATGGACGAGATCGGGCTGCTCGAAGGCGC GCAGGCGCTGGAGGCCCTGGTGGCCCGCCATCCCAACGTCGAGCGCGTCATCTGCGGCCACCTGCACCGCAGCATCCAGG TGCGCTTCGGCGGCACGATCGCGGCCACGGTGCCCTCGCCGGCGCACCAGGTGTGCCTGGACCTCGCGCCCGATGCCGCG TCGGCCTGGACGCTGGAGCCCCCGGGCTTCGCCGTGCATGCGCTGCCCGCAGGTGGGCGGCTGGTGAGCCACCTGGCAGC CAGCGGGCAGTATCCGGGCCCCTACCCGTTCCACGACGGCGGGCGGCTCATCGACTGA
Upstream 100 bases:
>100_bases CCACGCCGCCCGCGCGGGCGATGCGGTGGCCGTGCGCATCGCGCCGCAGCGGCTCATGCCGCTGGCCGAAGACACTGCCG CCTGAAACGCAGACCCATCC
Downstream 100 bases:
>100_bases CGGCCGGCGCGGGCACCGCGCCCGTGCCGGCATTCGCTCAGAAAACGTACTTGCCCAGCGCCGCTTCGCGGCGCTCGCCG ATGGCGTGCCGGGCCTCGCC
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTRSMTASTAPTTLLLQLSDLHIREPGRLAYGRLDTAPYLRQAVETVLRMPQRPDAIVATGDLTDFGRPEEYGHLRKLLA PLGAIPLYLLPGNHDDRAQLRASFPGHGYLGTDGFVQFSVSVGGLQLIALDTVVPGASEGSLCAERLEWLAAQLDASRGR PVVIAMHHPPFRTLIGHMDEIGLLEGAQALEALVARHPNVERVICGHLHRSIQVRFGGTIAATVPSPAHQVCLDLAPDAA SAWTLEPPGFAVHALPAGGRLVSHLAASGQYPGPYPFHDGGRLID
Sequences:
>Translated_285_residues MTRSMTASTAPTTLLLQLSDLHIREPGRLAYGRLDTAPYLRQAVETVLRMPQRPDAIVATGDLTDFGRPEEYGHLRKLLA PLGAIPLYLLPGNHDDRAQLRASFPGHGYLGTDGFVQFSVSVGGLQLIALDTVVPGASEGSLCAERLEWLAAQLDASRGR PVVIAMHHPPFRTLIGHMDEIGLLEGAQALEALVARHPNVERVICGHLHRSIQVRFGGTIAATVPSPAHQVCLDLAPDAA SAWTLEPPGFAVHALPAGGRLVSHLAASGQYPGPYPFHDGGRLID >Mature_284_residues TRSMTASTAPTTLLLQLSDLHIREPGRLAYGRLDTAPYLRQAVETVLRMPQRPDAIVATGDLTDFGRPEEYGHLRKLLAP LGAIPLYLLPGNHDDRAQLRASFPGHGYLGTDGFVQFSVSVGGLQLIALDTVVPGASEGSLCAERLEWLAAQLDASRGRP VVIAMHHPPFRTLIGHMDEIGLLEGAQALEALVARHPNVERVICGHLHRSIQVRFGGTIAATVPSPAHQVCLDLAPDAAS AWTLEPPGFAVHALPAGGRLVSHLAASGQYPGPYPFHDGGRLID
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=254, Percent_Identity=27.5590551181102, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 30497; Mature: 30366
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSMTASTAPTTLLLQLSDLHIREPGRLAYGRLDTAPYLRQAVETVLRMPQRPDAIVAT CCCCCCCCCCCEEEEEEECCCEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE GDLTDFGRPEEYGHLRKLLAPLGAIPLYLLPGNHDDRAQLRASFPGHGYLGTDGFVQFSV CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEEE SVGGLQLIALDTVVPGASEGSLCAERLEWLAAQLDASRGRPVVIAMHHPPFRTLIGHMDE EECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHH IGLLEGAQALEALVARHPNVERVICGHLHRSIQVRFGGTIAATVPSPAHQVCLDLAPDAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCEEEEECCCCHHHHHHHCCCCCC SAWTLEPPGFAVHALPAGGRLVSHLAASGQYPGPYPFHDGGRLID CCEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TRSMTASTAPTTLLLQLSDLHIREPGRLAYGRLDTAPYLRQAVETVLRMPQRPDAIVAT CCCCCCCCCCEEEEEEECCCEECCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEE GDLTDFGRPEEYGHLRKLLAPLGAIPLYLLPGNHDDRAQLRASFPGHGYLGTDGFVQFSV CCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHEEECCCCCCCCCCCCEEEEEE SVGGLQLIALDTVVPGASEGSLCAERLEWLAAQLDASRGRPVVIAMHHPPFRTLIGHMDE EECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCHHH IGLLEGAQALEALVARHPNVERVICGHLHRSIQVRFGGTIAATVPSPAHQVCLDLAPDAA HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCEEEEECCCCHHHHHHHCCCCCC SAWTLEPPGFAVHALPAGGRLVSHLAASGQYPGPYPFHDGGRLID CCEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA