Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yjbB [H]
Identifier: 120612114
GI number: 120612114
Start: 3823746
End: 3825476
Strand: Direct
Name: yjbB [H]
Synonym: Aave_3461
Alternate gene names: 120612114
Gene position: 3823746-3825476 (Clockwise)
Preceding gene: 120612111
Following gene: 120612117
Centisome position: 71.43
GC content: 68.63
Gene sequence:
>1731_bases GTGGCCTCTGGAAAACAACATCTGCCGCGGCTCTGCCGTGGGAGGCCTGCGAACACCCGATCCATGAAGCACCTGTTGAA TCTGCTGGCCGCCGTGGCCCTGCTGGTCTGGGGTACGCACCTCGTGCGTACCGGGGTGCTGCGCGTGTTCGGCGCCAACC TGCGCACGCTGCTGGCGCGCAGCATGGGCAACCGCTTCTCGGCGGCGCTGTCGGGCATCGGGGTCACGGCCCTGGTGCAG TCGAGCACCGCCACCTCGCTCATGACCTCGTCCTTCGTCGGGCAGGGGCTCATCACGCTGCCGGCCGCGCTGGCGGTGAT GCGCGGGGCGGACATCGGCACGGCCCTCATGTCCGTGCTGTTCTCCACCGACCTGTCCTGGCTGTCGCCGCTGTTCATCT TCGTGGGCGTGGTGCTGTTCATCACCCGGCAGGCGAGCACCGCCGGGCGCGTGGGGCGCGTGCTGATCGGGCTGGGCCTG ATGCTGCTGGCGCTGGAGATGGTGGTGCAGGCCAGCGGGCCGATGCTGGCCTCGCCGATCATCCGCACCCTGCTCGGCTC GCTCGACAGCGACCTGGTGCTGGAGGTGGTGATGGGCGCGGTGCTGGCGGTGATCGCCTATTCGAGCCTCGCCATCGTGC TGCTGATCTCGGCGATGGCGGCTTCCAGCGTGGTGCCGCTGGACGTGGCGCTGGGCCTGGTGCTGGGCGCCAATCTCGGC AGCGGCCTGCTGGCGGTCATCACCACCGCCAAGTCGGCCGTGGAAGTGCGGCAGGTGACCGTGGGCAACCTGATGTTCAA GCTCATGGGCGTGCTGGTGGTCGCGCCGTTGGTGGGACTGTGGCTGCGGCACGTGCAGCCGCACATGCCCGGCGCGGCCC AGAGCGTGGTGCTCTTCCACCTGGCTTTCAACGTGGTGGTCAGCCTGGGCTTCATCGCGTTCACGCAGTGGGTGGCCCGC GCCGTCACGCGGCTGCTGCCCCCGCCCGAAGGTCCGCCCAGCCGCCGGCCGCAGCACCTGGACCCTTCAGCGCTCTCCAC CCCCTCGCTGGCGATGTCCTGCGCGGCGCGGGAGGCGCTCTACCAGGCGGACGTGGTGGAGACCATGCTGCTGGGCGTGC TCGACGTGATCCGCCGGGACGACGTGCAGCTGGCGCAGCAACTGCGCAAGATGGACGACGAGGTGGACGGGCTGTACTCG TCCATCAAGTATTACCTCACCCAGATCTCCCGGGGAGCGCTGGGCGAGGAGGAAAGCCGGCGCTGGACGGACATCATCAG CTTCACCATCAACATGGAGCAGGTGGCCGACATCATCGAGCGCGTGCTCACGGACATCGAGGACAAGAAGATCCGCAAGG GCCGACGCTTCTCCGATGCGGGCATGGCCGAGATCACCGAGCTGCACGGCCGGCTGGTGAGCAACCTGCGCCTGGCGATG AGCGTGTTCCTCAACGGCAATGTGCGCGACGCGCAGCGGCTGCTGGAGGAAAAGACGCGTTTCCGCGACCTGGAACGCGC CTACGCGGCGACCCACCTCGGCCGCCTGTCCGACAAGACCGTGCAGAGCATGGAAACCAGCTCGCTGCACATCGACCTCA TCAGCGACCTCAAGCGCATCAATTCGCACATCTGCTCGCTGGCCTACCCGATCCTCGACTCCGCGGGGGCGCTGGCGCCG AGCCGGCTGCGCAGCGCGCCCGGCGATGCGGGTGCCGATCCGCTGGCCTGA
Upstream 100 bases:
>100_bases CAGGCCGGGGCGAAGGCGCCCGCCCTCGCGCTTCACCGCATCCCATGCCCCCGGCACGGCCGTGGCCGCCGGCCGATTGC TATGGATTCAGGAGTATGCT
Downstream 100 bases:
>100_bases CCCCCGTCAGTGCCGATACCAGTCGCGCCAGCGGCTGTCCACGTTGCCCATGGCCTCGCACAGCGGCAGGATGTCCTGCG CGCTGCACCGGGCAGCATGG
Product: Na/Pi-cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQ SSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGL MLLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVAR AVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYS SIKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAP SRLRSAPGDAGADPLA
Sequences:
>Translated_576_residues MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQ SSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGL MLLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVAR AVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYS SIKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAP SRLRSAPGDAGADPLA >Mature_575_residues ASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQS STATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGLM LLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLGS GLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVARA VTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYSS IKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAMS VFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAPS RLRSAPGDAGADPLA
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=534, Percent_Identity=47.565543071161, Blast_Score=459, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 61813; Mature: 61681
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLAR CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMGNRFSAALSGIGVTALVQSSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVL HHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH FSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGLMLLALEMVVQASGPMLASPI HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAFNVVVSLGFIAFTQWVARAVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH YQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYSSIKYYLTQISRGALGEEESR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSHICSLAYPILDSAGALAPSRLRSAPGDAGADPLA HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure ASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLAR CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMGNRFSAALSGIGVTALVQSSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVL HHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH FSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGLMLLALEMVVQASGPMLASPI HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH IRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LAFNVVVSLGFIAFTQWVARAVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH YQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYSSIKYYLTQISRGALGEEESR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRI HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSHICSLAYPILDSAGALAPSRLRSAPGDAGADPLA HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]