Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is yjbB [H]

Identifier: 120612114

GI number: 120612114

Start: 3823746

End: 3825476

Strand: Direct

Name: yjbB [H]

Synonym: Aave_3461

Alternate gene names: 120612114

Gene position: 3823746-3825476 (Clockwise)

Preceding gene: 120612111

Following gene: 120612117

Centisome position: 71.43

GC content: 68.63

Gene sequence:

>1731_bases
GTGGCCTCTGGAAAACAACATCTGCCGCGGCTCTGCCGTGGGAGGCCTGCGAACACCCGATCCATGAAGCACCTGTTGAA
TCTGCTGGCCGCCGTGGCCCTGCTGGTCTGGGGTACGCACCTCGTGCGTACCGGGGTGCTGCGCGTGTTCGGCGCCAACC
TGCGCACGCTGCTGGCGCGCAGCATGGGCAACCGCTTCTCGGCGGCGCTGTCGGGCATCGGGGTCACGGCCCTGGTGCAG
TCGAGCACCGCCACCTCGCTCATGACCTCGTCCTTCGTCGGGCAGGGGCTCATCACGCTGCCGGCCGCGCTGGCGGTGAT
GCGCGGGGCGGACATCGGCACGGCCCTCATGTCCGTGCTGTTCTCCACCGACCTGTCCTGGCTGTCGCCGCTGTTCATCT
TCGTGGGCGTGGTGCTGTTCATCACCCGGCAGGCGAGCACCGCCGGGCGCGTGGGGCGCGTGCTGATCGGGCTGGGCCTG
ATGCTGCTGGCGCTGGAGATGGTGGTGCAGGCCAGCGGGCCGATGCTGGCCTCGCCGATCATCCGCACCCTGCTCGGCTC
GCTCGACAGCGACCTGGTGCTGGAGGTGGTGATGGGCGCGGTGCTGGCGGTGATCGCCTATTCGAGCCTCGCCATCGTGC
TGCTGATCTCGGCGATGGCGGCTTCCAGCGTGGTGCCGCTGGACGTGGCGCTGGGCCTGGTGCTGGGCGCCAATCTCGGC
AGCGGCCTGCTGGCGGTCATCACCACCGCCAAGTCGGCCGTGGAAGTGCGGCAGGTGACCGTGGGCAACCTGATGTTCAA
GCTCATGGGCGTGCTGGTGGTCGCGCCGTTGGTGGGACTGTGGCTGCGGCACGTGCAGCCGCACATGCCCGGCGCGGCCC
AGAGCGTGGTGCTCTTCCACCTGGCTTTCAACGTGGTGGTCAGCCTGGGCTTCATCGCGTTCACGCAGTGGGTGGCCCGC
GCCGTCACGCGGCTGCTGCCCCCGCCCGAAGGTCCGCCCAGCCGCCGGCCGCAGCACCTGGACCCTTCAGCGCTCTCCAC
CCCCTCGCTGGCGATGTCCTGCGCGGCGCGGGAGGCGCTCTACCAGGCGGACGTGGTGGAGACCATGCTGCTGGGCGTGC
TCGACGTGATCCGCCGGGACGACGTGCAGCTGGCGCAGCAACTGCGCAAGATGGACGACGAGGTGGACGGGCTGTACTCG
TCCATCAAGTATTACCTCACCCAGATCTCCCGGGGAGCGCTGGGCGAGGAGGAAAGCCGGCGCTGGACGGACATCATCAG
CTTCACCATCAACATGGAGCAGGTGGCCGACATCATCGAGCGCGTGCTCACGGACATCGAGGACAAGAAGATCCGCAAGG
GCCGACGCTTCTCCGATGCGGGCATGGCCGAGATCACCGAGCTGCACGGCCGGCTGGTGAGCAACCTGCGCCTGGCGATG
AGCGTGTTCCTCAACGGCAATGTGCGCGACGCGCAGCGGCTGCTGGAGGAAAAGACGCGTTTCCGCGACCTGGAACGCGC
CTACGCGGCGACCCACCTCGGCCGCCTGTCCGACAAGACCGTGCAGAGCATGGAAACCAGCTCGCTGCACATCGACCTCA
TCAGCGACCTCAAGCGCATCAATTCGCACATCTGCTCGCTGGCCTACCCGATCCTCGACTCCGCGGGGGCGCTGGCGCCG
AGCCGGCTGCGCAGCGCGCCCGGCGATGCGGGTGCCGATCCGCTGGCCTGA

Upstream 100 bases:

>100_bases
CAGGCCGGGGCGAAGGCGCCCGCCCTCGCGCTTCACCGCATCCCATGCCCCCGGCACGGCCGTGGCCGCCGGCCGATTGC
TATGGATTCAGGAGTATGCT

Downstream 100 bases:

>100_bases
CCCCCGTCAGTGCCGATACCAGTCGCGCCAGCGGCTGTCCACGTTGCCCATGGCCTCGCACAGCGGCAGGATGTCCTGCG
CGCTGCACCGGGCAGCATGG

Product: Na/Pi-cotransporter II-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQ
SSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGL
MLLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG
SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVAR
AVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYS
SIKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM
SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAP
SRLRSAPGDAGADPLA

Sequences:

>Translated_576_residues
MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQ
SSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGL
MLLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG
SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVAR
AVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYS
SIKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM
SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAP
SRLRSAPGDAGADPLA
>Mature_575_residues
ASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLARSMGNRFSAALSGIGVTALVQS
STATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVLFSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGLM
LLALEMVVQASGPMLASPIIRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLGS
GLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFHLAFNVVVSLGFIAFTQWVARA
VTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREALYQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYSS
IKYYLTQISRGALGEEESRRWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAMS
VFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRINSHICSLAYPILDSAGALAPS
RLRSAPGDAGADPLA

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=534, Percent_Identity=47.565543071161, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 61813; Mature: 61681

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLAR
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMGNRFSAALSGIGVTALVQSSTATSLMTSSFVGQGLITLPAALAVMRGADIGTALMSVL
HHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH
FSTDLSWLSPLFIFVGVVLFITRQASTAGRVGRVLIGLGLMLLALEMVVQASGPMLASPI
HHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IRTLLGSLDSDLVLEVVMGAVLAVIAYSSLAIVLLISAMAASSVVPLDVALGLVLGANLG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
SGLLAVITTAKSAVEVRQVTVGNLMFKLMGVLVVAPLVGLWLRHVQPHMPGAAQSVVLFH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LAFNVVVSLGFIAFTQWVARAVTRLLPPPEGPPSRRPQHLDPSALSTPSLAMSCAAREAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YQADVVETMLLGVLDVIRRDDVQLAQQLRKMDDEVDGLYSSIKYYLTQISRGALGEEESR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
RWTDIISFTINMEQVADIIERVLTDIEDKKIRKGRRFSDAGMAEITELHGRLVSNLRLAM
HHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SVFLNGNVRDAQRLLEEKTRFRDLERAYAATHLGRLSDKTVQSMETSSLHIDLISDLKRI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSHICSLAYPILDSAGALAPSRLRSAPGDAGADPLA
HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ASGKQHLPRLCRGRPANTRSMKHLLNLLAAVALLVWGTHLVRTGVLRVFGANLRTLLAR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]