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The map label for this gene is potC [C]

Identifier: 120612109

GI number: 120612109

Start: 3818885

End: 3819682

Strand: Direct

Name: potC [C]

Synonym: Aave_3456

Alternate gene names: 120612109

Gene position: 3818885-3819682 (Clockwise)

Preceding gene: 120612108

Following gene: 120612110

Centisome position: 71.34

GC content: 68.42

Gene sequence:

>798_bases
ATGCGCAACGCACGACAGGCACCCTGGGCGCTGATCGCCCTCACCGCGCTGGTGACGCTCTTCATGGCCGCGCCCATCGC
CCTGTCGGTGATGGCCGGGCTGGTCCACAACTACGGCACGGGGCTGCGCAGCGGTCTCACGCTGCGCTGGCTGGGCGAGG
TGTGGGAGCACTACGGGAGCACCGTGACCTGGTCGCTGTGGCTCGCACTGCTGTGCGTGGCGGGCAACCTGCTGATCGGC
GTACCCTGCGCCTATGCGCTGGCGCGTAGCCGCTCGCGCGCGGCGCGGCTCTTCGAGGAGTTGCTGACCCTGCCCGTGGC
GGTGCCGGGGCTGGCGAGCGCGCTGGCGCTGATCCTGGCCTACGGCTCTCTGCAGGGCTTTCGCCAGAGCTTCGCCTTCA
TCCTGGTCGGGCACATGGTGTTCACGCTGCCTTTCATGGTGCGCACCGTGGGCGCGGCCTTCCGGAAGGACGAACTGCGC
TCGCTGGAAGAGGCCGCGCGCTCGCTGGGCGCCAGCTTCTCTCAGCGCTTCCTCGGCGTGCTGGTGCCGGCCGTGCTGCC
AGCCATCGTGGCCGGCAGCCTGATGGTGTTCACGCTGTCGGTGGGCGAATTCAACCTCACCTGGATGCTGCACACCCCGC
TCACCCGCACGCTGCCCGTGGGGCTGGCCGACAGCTATGCCTCGATGCGCATCGAGATCGGTTCGGCCTACACCCTTGTT
TTCCTGATCGTGATCCTGCCCGTGCTGTGGGGCCTGCAGGCCGCCGGCACGTTCATCGAGAAACACCATGGCACTTGA

Upstream 100 bases:

>100_bases
GCTGGCAGCCAGCCTGTCGATCGCGCTGGGCCTGATCACCTGGCTGGTGCTCTGGGTGTCCCGCCGCTGGGCCGGCACGT
CCGCGTTCTAAGGAATCTCC

Downstream 100 bases:

>100_bases
ACTCGAACGCACGCGCGTGGACATCGTCCGCTGCGCGAAGACCTATGCCGGCGGCGCGCGCGGCCTGCAGCCCACCGACC
TGGCCGTGGAGCCGGGCGAG

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC-Type Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease; ABC Transporter Membrane Component; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; ABC-Type Transport System Permease Protein; ABC TRANSPORTER Membrane Component; Polyamine Transporter Subunit; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Molybdenum ABC Transporter Permease; Permease Protein

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRNARQAPWALIALTALVTLFMAAPIALSVMAGLVHNYGTGLRSGLTLRWLGEVWEHYGSTVTWSLWLALLCVAGNLLIG
VPCAYALARSRSRAARLFEELLTLPVAVPGLASALALILAYGSLQGFRQSFAFILVGHMVFTLPFMVRTVGAAFRKDELR
SLEEAARSLGASFSQRFLGVLVPAVLPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTLV
FLIVILPVLWGLQAAGTFIEKHHGT

Sequences:

>Translated_265_residues
MRNARQAPWALIALTALVTLFMAAPIALSVMAGLVHNYGTGLRSGLTLRWLGEVWEHYGSTVTWSLWLALLCVAGNLLIG
VPCAYALARSRSRAARLFEELLTLPVAVPGLASALALILAYGSLQGFRQSFAFILVGHMVFTLPFMVRTVGAAFRKDELR
SLEEAARSLGASFSQRFLGVLVPAVLPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTLV
FLIVILPVLWGLQAAGTFIEKHHGT
>Mature_265_residues
MRNARQAPWALIALTALVTLFMAAPIALSVMAGLVHNYGTGLRSGLTLRWLGEVWEHYGSTVTWSLWLALLCVAGNLLIG
VPCAYALARSRSRAARLFEELLTLPVAVPGLASALALILAYGSLQGFRQSFAFILVGHMVFTLPFMVRTVGAAFRKDELR
SLEEAARSLGASFSQRFLGVLVPAVLPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTLV
FLIVILPVLWGLQAAGTFIEKHHGT

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787368, Length=181, Percent_Identity=28.7292817679558, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28641; Mature: 28641

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNARQAPWALIALTALVTLFMAAPIALSVMAGLVHNYGTGLRSGLTLRWLGEVWEHYGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCC
TVTWSLWLALLCVAGNLLIGVPCAYALARSRSRAARLFEELLTLPVAVPGLASALALILA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YGSLQGFRQSFAFILVGHMVFTLPFMVRTVGAAFRKDELRSLEEAARSLGASFSQRFLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPAVLPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTLV
HHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCHHHCCCCHHHHHHHHEEECCHHHHHH
FLIVILPVLWGLQAAGTFIEKHHGT
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNARQAPWALIALTALVTLFMAAPIALSVMAGLVHNYGTGLRSGLTLRWLGEVWEHYGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHCC
TVTWSLWLALLCVAGNLLIGVPCAYALARSRSRAARLFEELLTLPVAVPGLASALALILA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YGSLQGFRQSFAFILVGHMVFTLPFMVRTVGAAFRKDELRSLEEAARSLGASFSQRFLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPAVLPAIVAGSLMVFTLSVGEFNLTWMLHTPLTRTLPVGLADSYASMRIEIGSAYTLV
HHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCHHHCCCCHHHHHHHHEEECCHHHHHH
FLIVILPVLWGLQAAGTFIEKHHGT
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA