Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cysU [H]
Identifier: 120612108
GI number: 120612108
Start: 3818051
End: 3818875
Strand: Direct
Name: cysU [H]
Synonym: Aave_3455
Alternate gene names: 120612108
Gene position: 3818051-3818875 (Clockwise)
Preceding gene: 120612107
Following gene: 120612109
Centisome position: 71.33
GC content: 71.15
Gene sequence:
>825_bases ATGACGGCACGCCACGGCGGCTTCGCTCCTTCGCGCGCCCTGCTGGCCGCGTGCGCCGCGCCGGCCGTGGCGTTCTTCGC GGCCTTCTGGCTGCTGCCCACGGCCCTGCTGGTGGCGCTGCCGGCGCGCCAGGGCTGGGCGACGTATTTCGCGGTGCTGA CGAACGGCCGCTACCTGCAGAGCCTGCTGCAGACGCTGGGTCTGTCGCTGGCCGTGACGCTCGCCACGCTGATGCTCGGC GCCCTGGTGGGCATCACGCTGGCGCGCCAGCGCTTTCCCGGGCGGCAGCTGCTGCTGTCGCTGCTGACGCTGCCGCTGTC CTTTCCCGGCGTGATCGTGGGATTCTTCATGATTTTGCTGGGCGGTCGCCAGGGCACGCTGGCGGGCCTGACGCAGGCGC TGGGCTGGGGCCGGATCACCTTCGCCTATGGGCTGGTGGGCCTGTTCCTGGCCTACCTGTACTTTTCGCTGCCGCGCGCC ATCGCCACCTACACGGCGGCGGCCGGCGCCATGGACGCGCAGCTCGAAGAAGCCGCGCGCTCGCTCGGCGCCTCGCGCTG GCGCGTGGCGCGCGACGTGTGGATGCCGGCGCTCGCGCCCACCACGCTGGCCTGCGGCGCGATCGTGTTCGCCACGGCCA TGGGCGCCTTCGGCACGGCGTTCACGCTGTCGGCGAAGTTCGAGGTGCTGCCCATCACCATCTACGACGAATTCACCAAC TACGCCAACTTCGCGCTGGCAGCCAGCCTGTCGATCGCGCTGGGCCTGATCACCTGGCTGGTGCTCTGGGTGTCCCGCCG CTGGGCCGGCACGTCCGCGTTCTAA
Upstream 100 bases:
>100_bases TCCTGCCCGCCAGCGAATATGCCCGCGCGAAGACGGTGGACTACGGCCGCATGGCCGCGGTGCAGAAGGCGTTCTCCGAC CGCTACCTGCGGGACGTGAA
Downstream 100 bases:
>100_bases GGAATCTCCATGCGCAACGCACGACAGGCACCCTGGGCGCTGATCGCCCTCACCGCGCTGGTGACGCTCTTCATGGCCGC GCCCATCGCCCTGTCGGTGA
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTARHGGFAPSRALLAACAAPAVAFFAAFWLLPTALLVALPARQGWATYFAVLTNGRYLQSLLQTLGLSLAVTLATLMLG ALVGITLARQRFPGRQLLLSLLTLPLSFPGVIVGFFMILLGGRQGTLAGLTQALGWGRITFAYGLVGLFLAYLYFSLPRA IATYTAAAGAMDAQLEEAARSLGASRWRVARDVWMPALAPTTLACGAIVFATAMGAFGTAFTLSAKFEVLPITIYDEFTN YANFALAASLSIALGLITWLVLWVSRRWAGTSAF
Sequences:
>Translated_274_residues MTARHGGFAPSRALLAACAAPAVAFFAAFWLLPTALLVALPARQGWATYFAVLTNGRYLQSLLQTLGLSLAVTLATLMLG ALVGITLARQRFPGRQLLLSLLTLPLSFPGVIVGFFMILLGGRQGTLAGLTQALGWGRITFAYGLVGLFLAYLYFSLPRA IATYTAAAGAMDAQLEEAARSLGASRWRVARDVWMPALAPTTLACGAIVFATAMGAFGTAFTLSAKFEVLPITIYDEFTN YANFALAASLSIALGLITWLVLWVSRRWAGTSAF >Mature_273_residues TARHGGFAPSRALLAACAAPAVAFFAAFWLLPTALLVALPARQGWATYFAVLTNGRYLQSLLQTLGLSLAVTLATLMLGA LVGITLARQRFPGRQLLLSLLTLPLSFPGVIVGFFMILLGGRQGTLAGLTQALGWGRITFAYGLVGLFLAYLYFSLPRAI ATYTAAAGAMDAQLEEAARSLGASRWRVARDVWMPALAPTTLACGAIVFATAMGAFGTAFTLSAKFEVLPITIYDEFTNY ANFALAASLSIALGLITWLVLWVSRRWAGTSAF
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=214, Percent_Identity=29.4392523364486, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1786980, Length=223, Percent_Identity=32.7354260089686, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786254, Length=168, Percent_Identity=31.547619047619, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082099, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29125; Mature: 28994
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARHGGFAPSRALLAACAAPAVAFFAAFWLLPTALLVALPARQGWATYFAVLTNGRYLQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH SLLQTLGLSLAVTLATLMLGALVGITLARQRFPGRQLLLSLLTLPLSFPGVIVGFFMILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH GGRQGTLAGLTQALGWGRITFAYGLVGLFLAYLYFSLPRAIATYTAAAGAMDAQLEEAAR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGASRWRVARDVWMPALAPTTLACGAIVFATAMGAFGTAFTLSAKFEVLPITIYDEFTN HHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEHHHHH YANFALAASLSIALGLITWLVLWVSRRWAGTSAF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TARHGGFAPSRALLAACAAPAVAFFAAFWLLPTALLVALPARQGWATYFAVLTNGRYLQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH SLLQTLGLSLAVTLATLMLGALVGITLARQRFPGRQLLLSLLTLPLSFPGVIVGFFMILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHH GGRQGTLAGLTQALGWGRITFAYGLVGLFLAYLYFSLPRAIATYTAAAGAMDAQLEEAAR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGASRWRVARDVWMPALAPTTLACGAIVFATAMGAFGTAFTLSAKFEVLPITIYDEFTN HHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEEEEEHHHHH YANFALAASLSIALGLITWLVLWVSRRWAGTSAF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]