Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 120612092

GI number: 120612092

Start: 3797089

End: 3798294

Strand: Direct

Name: mmgC [H]

Synonym: Aave_3439

Alternate gene names: 120612092

Gene position: 3797089-3798294 (Clockwise)

Preceding gene: 120612091

Following gene: 120612093

Centisome position: 70.94

GC content: 67.16

Gene sequence:

>1206_bases
ATGGACCTTGCTTTCACCCCCGAAGAACAGGCCTTCCGCGAAGAGATTCGCGCGTGGGTCCGCGAGCATCTGCCGGCCGA
GACCGCGCACAAGGTGCACAACGCGCTGCGCCTGACGCGCGACGACCTGCAGGGCTGGGCGAAGATCCTCGGCAAGAAGG
GCTGGCTGGGCTTCGGCTGGCCCAAGCAGTTCGGCGGCCCCGGCTGGACGGCCGTGCAGAAGCATTTGTTCGAGGAAGAG
TGCGCGCTGGCCGGTGCGCCCCGCATCGTGCCGTTCGGCCCGGTGATGGTGGCCCCCGTGATCATGGCCTTCGGTTCGCC
CGAGCAGCAGCAGCGCTTCCTGCCCGGCATCGCGAGCGGCGAGGTCTGGTGGAGCCAGGGCTACAGCGAGCCGGGCTCGG
GCTCGGACCTGGCCAGCCTCAAGACCCGCGCCGAGCGCCGCGGCGACAAGTACATCGTCAACGGCCAGAAAACGTGGACC
ACGCTGGGCCAGTACGGCGACTGGATGTTCAACCTCGTGCGCACCAGCACGGAAGGCAAGCCGCAGACCGGCATCAGCTT
CCTGCTGCTGGACATGAAGTCGCCCGGCGTCACCGTGCGGCCGATCAAGCTGCTGGACGGCGAATGCGAGGTGAACGAGG
TGTTCTTCGACAACGTCGAAGTGCCCGCCGAGAACCTGATCGGCGAGGAGAACAAGGGCTGGACCTACGCCAAGCACCTG
CTCTCCCACGAGCGCACGAACATCGCGGACGTGAATCGCAGCAAGCGCGAGCTCGAGCGCCTCAAACGCATCGCGAAGAC
CGAGGGCGTGTGGGACGACCCGCGCTTGCGCGACCAGATCGCGCTGCTGGAGGTGGACATCGTGGCGCTGGAGATGCTGG
TGCTGCGCGTGCTCTCGGCCGAGAAGTCGGGCAAGAACTCGCTGGACATCGCCGGCCTGCTCAAGATCCGCGGCAGCGAG
ATCCAGCAGCGCTATGCCGAACTGATGATGCTGGCCGCCGGCCCGTACTCCCTGCCCTTCATCGAAGAAGCCATGGAGGC
CGGCTGGCAGGGCGACGCGGCGATGGGCGCGCTGGGCGGCTACCCGGGCGGCACGGTGGCGAACGCGCCGCTGGCGTCCA
CCTACTTCAACCTGCGCAAGACCACGATCTACGGGGGGAGCAACGAAGTCCAGCGAAATATCGTCGCTCAGACGGTGCTG
GGCTGA

Upstream 100 bases:

>100_bases
CAGCTCGGGGTGTCGCTCCCCGGACAGCCATAAAAAGCACGACCGTGCTACAAATTGCGGTATCGCGCCGGCCACGCCGG
CGCTCACACGGAGACACCGC

Downstream 100 bases:

>100_bases
TTTGCTTCCGAGGGAGCGACGATGTTTCGCTGGCGCGGTAACGCACCGCTCCCCCAGGCCCCCTCCGCGAGGGGGCTCCA
GCATGAGCTTCGCTGATCTT

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MDLAFTPEEQAFREEIRAWVREHLPAETAHKVHNALRLTRDDLQGWAKILGKKGWLGFGWPKQFGGPGWTAVQKHLFEEE
CALAGAPRIVPFGPVMVAPVIMAFGSPEQQQRFLPGIASGEVWWSQGYSEPGSGSDLASLKTRAERRGDKYIVNGQKTWT
TLGQYGDWMFNLVRTSTEGKPQTGISFLLLDMKSPGVTVRPIKLLDGECEVNEVFFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRSKRELERLKRIAKTEGVWDDPRLRDQIALLEVDIVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYAELMMLAAGPYSLPFIEEAMEAGWQGDAAMGALGGYPGGTVANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVL
G

Sequences:

>Translated_401_residues
MDLAFTPEEQAFREEIRAWVREHLPAETAHKVHNALRLTRDDLQGWAKILGKKGWLGFGWPKQFGGPGWTAVQKHLFEEE
CALAGAPRIVPFGPVMVAPVIMAFGSPEQQQRFLPGIASGEVWWSQGYSEPGSGSDLASLKTRAERRGDKYIVNGQKTWT
TLGQYGDWMFNLVRTSTEGKPQTGISFLLLDMKSPGVTVRPIKLLDGECEVNEVFFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRSKRELERLKRIAKTEGVWDDPRLRDQIALLEVDIVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYAELMMLAAGPYSLPFIEEAMEAGWQGDAAMGALGGYPGGTVANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVL
G
>Mature_401_residues
MDLAFTPEEQAFREEIRAWVREHLPAETAHKVHNALRLTRDDLQGWAKILGKKGWLGFGWPKQFGGPGWTAVQKHLFEEE
CALAGAPRIVPFGPVMVAPVIMAFGSPEQQQRFLPGIASGEVWWSQGYSEPGSGSDLASLKTRAERRGDKYIVNGQKTWT
TLGQYGDWMFNLVRTSTEGKPQTGISFLLLDMKSPGVTVRPIKLLDGECEVNEVFFDNVEVPAENLIGEENKGWTYAKHL
LSHERTNIADVNRSKRELERLKRIAKTEGVWDDPRLRDQIALLEVDIVALEMLVLRVLSAEKSGKNSLDIAGLLKIRGSE
IQQRYAELMMLAAGPYSLPFIEEAMEAGWQGDAAMGALGGYPGGTVANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVL
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=411, Percent_Identity=27.007299270073, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI226958412, Length=250, Percent_Identity=29.2, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958414, Length=217, Percent_Identity=30.8755760368664, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI4501859, Length=414, Percent_Identity=25.1207729468599, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI187960098, Length=404, Percent_Identity=23.7623762376238, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557231, Length=272, Percent_Identity=27.2058823529412, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4557233, Length=373, Percent_Identity=27.3458445040214, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI7656849, Length=211, Percent_Identity=31.7535545023697, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI21361497, Length=358, Percent_Identity=26.536312849162, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4557235, Length=213, Percent_Identity=30.5164319248826, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI76496475, Length=213, Percent_Identity=30.5164319248826, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4503943, Length=231, Percent_Identity=29.004329004329, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI7669494, Length=231, Percent_Identity=29.004329004329, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI87081958, Length=307, Percent_Identity=25.0814332247557, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786223, Length=409, Percent_Identity=24.4498777506112, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=367, Percent_Identity=28.6103542234332, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=350, Percent_Identity=26.2857142857143, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=354, Percent_Identity=24.8587570621469, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=253, Percent_Identity=31.2252964426877, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17505929, Length=205, Percent_Identity=32.6829268292683, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17570075, Length=268, Percent_Identity=25.7462686567164, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=205, Percent_Identity=31.7073170731707, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71990804, Length=304, Percent_Identity=25.9868421052632, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=208, Percent_Identity=30.2884615384615, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=208, Percent_Identity=30.2884615384615, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=24.9315068493151, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=198, Percent_Identity=29.2929292929293, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17533517, Length=220, Percent_Identity=25, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982178, Length=205, Percent_Identity=26.8292682926829, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI21355753, Length=213, Percent_Identity=32.8638497652582, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24666513, Length=294, Percent_Identity=27.2108843537415, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281363737, Length=380, Percent_Identity=24.4736842105263, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24660351, Length=181, Percent_Identity=32.5966850828729, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356377, Length=407, Percent_Identity=24.0786240786241, Blast_Score=85, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24646207, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19920834, Length=232, Percent_Identity=30.1724137931034, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44454; Mature: 44454

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLAFTPEEQAFREEIRAWVREHLPAETAHKVHNALRLTRDDLQGWAKILGKKGWLGFGW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PKQFGGPGWTAVQKHLFEEECALAGAPRIVPFGPVMVAPVIMAFGSPEQQQRFLPGIASG
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCC
EVWWSQGYSEPGSGSDLASLKTRAERRGDKYIVNGQKTWTTLGQYGDWMFNLVRTSTEGK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
PQTGISFLLLDMKSPGVTVRPIKLLDGECEVNEVFFDNVEVPAENLIGEENKGWTYAKHL
CCCCCEEEEEECCCCCCEEEEEEEECCCCCCHHHEECCCCCCHHHHCCCCCCCHHHHHHH
LSHERTNIADVNRSKRELERLKRIAKTEGVWDDPRLRDQIALLEVDIVALEMLVLRVLSA
HHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSGKNSLDIAGLLKIRGSEIQQRYAELMMLAAGPYSLPFIEEAMEAGWQGDAAMGALGG
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCC
YPGGTVANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVLG
CCCCCCCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLAFTPEEQAFREEIRAWVREHLPAETAHKVHNALRLTRDDLQGWAKILGKKGWLGFGW
CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PKQFGGPGWTAVQKHLFEEECALAGAPRIVPFGPVMVAPVIMAFGSPEQQQRFLPGIASG
CHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCC
EVWWSQGYSEPGSGSDLASLKTRAERRGDKYIVNGQKTWTTLGQYGDWMFNLVRTSTEGK
CHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCC
PQTGISFLLLDMKSPGVTVRPIKLLDGECEVNEVFFDNVEVPAENLIGEENKGWTYAKHL
CCCCCEEEEEECCCCCCEEEEEEEECCCCCCHHHEECCCCCCHHHHCCCCCCCHHHHHHH
LSHERTNIADVNRSKRELERLKRIAKTEGVWDDPRLRDQIALLEVDIVALEMLVLRVLSA
HHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSGKNSLDIAGLLKIRGSEIQQRYAELMMLAAGPYSLPFIEEAMEAGWQGDAAMGALGG
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHCCC
YPGGTVANAPLASTYFNLRKTTIYGGSNEVQRNIVAQTVLG
CCCCCCCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]