Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612075
Identifier: 120612075
GI number: 120612075
Start: 3779778
End: 3780806
Strand: Direct
Name: 120612075
Synonym: Aave_3422
Alternate gene names: NA
Gene position: 3779778-3780806 (Clockwise)
Preceding gene: 120612071
Following gene: 120612076
Centisome position: 70.61
GC content: 63.07
Gene sequence:
>1029_bases ATGCGGCCGGACCGACAATGCGGCGCAACATTCAGCCGAGGCCCCCTGCCGCCGTCTTCCTGGAACATGCCTCTCGTTAT CACCAGCCAGCCGCCAGGCCCGCGGTTTTCCATCGGTGCCGATGCTTCGATGCCCATCATCACCGTGACTGCGGAGCTGC AGGGCATTTCCATCCCGCCAGGTGCGACCCCCACGTACGAATGGAGCGCCACGCTGACCTTCAATGGCGGCGTTCCGCCC ACCAAGACTTTTTTTGGCGGAGGGCGATCGACCGAGCATCCGGTCATGCGGGCCCCGGCCGGGCACGCCAACACCTGGCG CATTCCGTTCTCGCATGTCCGGGGCGGTGTCCTCACGGTACACGTCATCGCCCGTGTGGGAGGTGCGACCCACGAGGCTA CATTGGGCTCTCTGCTGATCGCAGGAACCAACCCCACTCCGACAGCCATCCGTGCCTTCGCCGACAGCATCGGCGCCACC AAAGTGCGCTTTCGCAAGCAGTTGCGGCAGGAAAGCTCGCTCCAGCAGTTTCGTCCTCCTGAACTCTGGCCCAAATACAG CAGTGACCGCTTGGGAGGTGTGGGGCTCGCGCAGATAACGCGCCCGGCACCCACTGCGGATCAGGTATGGAACTGGAAGG AAAATATCCGGGCGGGCTGGGCCCTCTACAAGGAGAAGGAGCGCAATGCTCGCGCCTATCCGGCCGCTGTGCGCCGCAGC GATGAGTTCCGGCATCTGGTGAATGCCTACAACCAGGCCCGGGCGAGACAAGGCCTCCCCCCTGTCCAGGTGACGTTGCC CGATTTCACGGAAGATCAACTCGAACTGGACACCATCCGCGGCTTCAATGGCTATGCAAACAAGCTGCATGAATACCGGG TCCGCACCGAAGCAGGCAAGTTGTTCGTCACCCTCGGCCCGGACGGAAAGCAGGGCTCGGCCGAGTGGGAGCGGGTTCCC ACTGCAGAACGGGGAAGCAAAGGCGATCCGGCTTATGTGGAGCACGTCGAAGCTGCACAGGATTTCTGA
Upstream 100 bases:
>100_bases AAGCGGGCGAGTGTGCCATAGCGGCCGGAGGAGCACGCCGGGTCGCCTCCTCGCACCCGAAGTGCACAACAATTCGTGAC AATACGGCCGCGCAGTTGGC
Downstream 100 bases:
>100_bases CCTGGAGTCCGCCATGCCCATCCCTCACCCATCGCACCTCTGCCGGCTTTCCTCGGCACTGGCAACCGCTGCCCTGGCTT TGCTCAGCGCCTGCTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MRPDRQCGATFSRGPLPPSSWNMPLVITSQPPGPRFSIGADASMPIITVTAELQGISIPPGATPTYEWSATLTFNGGVPP TKTFFGGGRSTEHPVMRAPAGHANTWRIPFSHVRGGVLTVHVIARVGGATHEATLGSLLIAGTNPTPTAIRAFADSIGAT KVRFRKQLRQESSLQQFRPPELWPKYSSDRLGGVGLAQITRPAPTADQVWNWKENIRAGWALYKEKERNARAYPAAVRRS DEFRHLVNAYNQARARQGLPPVQVTLPDFTEDQLELDTIRGFNGYANKLHEYRVRTEAGKLFVTLGPDGKQGSAEWERVP TAERGSKGDPAYVEHVEAAQDF
Sequences:
>Translated_342_residues MRPDRQCGATFSRGPLPPSSWNMPLVITSQPPGPRFSIGADASMPIITVTAELQGISIPPGATPTYEWSATLTFNGGVPP TKTFFGGGRSTEHPVMRAPAGHANTWRIPFSHVRGGVLTVHVIARVGGATHEATLGSLLIAGTNPTPTAIRAFADSIGAT KVRFRKQLRQESSLQQFRPPELWPKYSSDRLGGVGLAQITRPAPTADQVWNWKENIRAGWALYKEKERNARAYPAAVRRS DEFRHLVNAYNQARARQGLPPVQVTLPDFTEDQLELDTIRGFNGYANKLHEYRVRTEAGKLFVTLGPDGKQGSAEWERVP TAERGSKGDPAYVEHVEAAQDF >Mature_342_residues MRPDRQCGATFSRGPLPPSSWNMPLVITSQPPGPRFSIGADASMPIITVTAELQGISIPPGATPTYEWSATLTFNGGVPP TKTFFGGGRSTEHPVMRAPAGHANTWRIPFSHVRGGVLTVHVIARVGGATHEATLGSLLIAGTNPTPTAIRAFADSIGAT KVRFRKQLRQESSLQQFRPPELWPKYSSDRLGGVGLAQITRPAPTADQVWNWKENIRAGWALYKEKERNARAYPAAVRRS DEFRHLVNAYNQARARQGLPPVQVTLPDFTEDQLELDTIRGFNGYANKLHEYRVRTEAGKLFVTLGPDGKQGSAEWERVP TAERGSKGDPAYVEHVEAAQDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37485; Mature: 37485
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPDRQCGATFSRGPLPPSSWNMPLVITSQPPGPRFSIGADASMPIITVTAELQGISIPP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCEEEEEEEECCCCCCC GATPTYEWSATLTFNGGVPPTKTFFGGGRSTEHPVMRAPAGHANTWRIPFSHVRGGVLTV CCCCCEEEEEEEEECCCCCCCHHEECCCCCCCCCEEECCCCCCCEEECCHHHHCCCEEEE HVIARVGGATHEATLGSLLIAGTNPTPTAIRAFADSIGATKVRFRKQLRQESSLQQFRPP EEHHHHCCCCHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC ELWPKYSSDRLGGVGLAQITRPAPTADQVWNWKENIRAGWALYKEKERNARAYPAAVRRS CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCC DEFRHLVNAYNQARARQGLPPVQVTLPDFTEDQLELDTIRGFNGYANKLHEYRVRTEAGK HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHEEECCCE LFVTLGPDGKQGSAEWERVPTAERGSKGDPAYVEHVEAAQDF EEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MRPDRQCGATFSRGPLPPSSWNMPLVITSQPPGPRFSIGADASMPIITVTAELQGISIPP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCEEEEEEEECCCCCCC GATPTYEWSATLTFNGGVPPTKTFFGGGRSTEHPVMRAPAGHANTWRIPFSHVRGGVLTV CCCCCEEEEEEEEECCCCCCCHHEECCCCCCCCCEEECCCCCCCEEECCHHHHCCCEEEE HVIARVGGATHEATLGSLLIAGTNPTPTAIRAFADSIGATKVRFRKQLRQESSLQQFRPP EEHHHHCCCCHHHCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC ELWPKYSSDRLGGVGLAQITRPAPTADQVWNWKENIRAGWALYKEKERNARAYPAAVRRS CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHCC DEFRHLVNAYNQARARQGLPPVQVTLPDFTEDQLELDTIRGFNGYANKLHEYRVRTEAGK HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEHHHHCCCCHHHHHHHHHHEEECCCE LFVTLGPDGKQGSAEWERVPTAERGSKGDPAYVEHVEAAQDF EEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA