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The map label for this gene is cc4 [H]

Identifier: 120612042

GI number: 120612042

Start: 3744484

End: 3745335

Strand: Reverse

Name: cc4 [H]

Synonym: Aave_3388

Alternate gene names: 120612042

Gene position: 3745335-3744484 (Counterclockwise)

Preceding gene: 120612043

Following gene: 120612041

Centisome position: 69.97

GC content: 75.7

Gene sequence:

>852_bases
ATGCCACCCTTACCCCCAGGCCCGCCCTGGCCTGCATTCCTTTCTTTCCTGCTGCACCGTTGCACGGCCCGGCTCCGGGC
CGGGCGGGTGGGGAGGGCAGGGTGCCGGGCGGCGGCCGTGGCGCTGGCGGCTCTGTCGGGCGGCGCCGGCCCTGCCGCAG
CGCAGGCACCCGCCAGTGCCCCGGTGCCCGCCACGCAGGCGCAGGCGCCGGCCGCCGGCATGGCCGACCGGGTCATCGCC
TGCACGGCCTGCCACGGCCGGGAAGGGCGGGCGACCCAGCAGGGCTACTTTCCGCGCATCGCCGGCAAACCCGCGGGCTA
CCTGTACCACCAGCTCCTGAACTTCCGCGACGGGCGCCGGAGCTATCCGCAGATGTCCTACCTGCTCGAGCACATGACGG
ACGACTATCTGCGCGAGATCGCCCGGCATTTCTCCGCGCTGGACCTTCCCTACGCCGCGCCGCCTCCGCCCCAGGCCCCC
CCGGCGACGCTGGAGCGGGGCCGCCGGCTGGTGCGCGAGGGCGATGCCCGCCGCGGCATACCCGCCTGCGTCCAATGCCA
CGGCGGCGCCATGACCGGCGTGCAGCCGGCCATCCCTGCGCTCGTCGGCCTGCCGCGCGACTACCTCAACAGCCAGATCG
GCGCCTGGCAGACCGGCCAGCGCCGCTCGCAGGCGCCCGATTGCATGGCCCGCGTGGCGCGGCAGCTCACGGCCGAGGAT
GTGAGCGCCATCTCGGCCTGGCTCGCCGCCCAGCCGGTGGCCGGCAGCGGCAAGCCCGCGGACGCACCCGCCGGCCCGTT
GCCCATGCCCTGCGGCGGCGTGGACGTGTCCGCCAGGGGGAGCACGCCATGA

Upstream 100 bases:

>100_bases
CGGCGGTGTGACGCGGCGGGCTGTACGTGCCGGCCGGGGGTGCGTAGAGTGGCGGGGCAGGGCGCCCCGCCCTTGCGACG
AACGAAGAGACAAAACCCCC

Downstream 100 bases:

>100_bases
GCGGGCCGCCATTGCGTGCACGGAGCTTCTGGCGGCGCTGGCCTGCGCTCGCAGGTATGGCCTTGCTGGCCGGCCTGGCG
GCCTGCGCGGTGCTCGTGGC

Product: cytochrome c553-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPPLPPGPPWPAFLSFLLHRCTARLRAGRVGRAGCRAAAVALAALSGGAGPAAAQAPASAPVPATQAQAPAAGMADRVIA
CTACHGREGRATQQGYFPRIAGKPAGYLYHQLLNFRDGRRSYPQMSYLLEHMTDDYLREIARHFSALDLPYAAPPPPQAP
PATLERGRRLVREGDARRGIPACVQCHGGAMTGVQPAIPALVGLPRDYLNSQIGAWQTGQRRSQAPDCMARVARQLTAED
VSAISAWLAAQPVAGSGKPADAPAGPLPMPCGGVDVSARGSTP

Sequences:

>Translated_283_residues
MPPLPPGPPWPAFLSFLLHRCTARLRAGRVGRAGCRAAAVALAALSGGAGPAAAQAPASAPVPATQAQAPAAGMADRVIA
CTACHGREGRATQQGYFPRIAGKPAGYLYHQLLNFRDGRRSYPQMSYLLEHMTDDYLREIARHFSALDLPYAAPPPPQAP
PATLERGRRLVREGDARRGIPACVQCHGGAMTGVQPAIPALVGLPRDYLNSQIGAWQTGQRRSQAPDCMARVARQLTAED
VSAISAWLAAQPVAGSGKPADAPAGPLPMPCGGVDVSARGSTP
>Mature_282_residues
PPLPPGPPWPAFLSFLLHRCTARLRAGRVGRAGCRAAAVALAALSGGAGPAAAQAPASAPVPATQAQAPAAGMADRVIAC
TACHGREGRATQQGYFPRIAGKPAGYLYHQLLNFRDGRRSYPQMSYLLEHMTDDYLREIARHFSALDLPYAAPPPPQAPP
ATLERGRRLVREGDARRGIPACVQCHGGAMTGVQPAIPALVGLPRDYLNSQIGAWQTGQRRSQAPDCMARVARQLTAEDV
SAISAWLAAQPVAGSGKPADAPAGPLPMPCGGVDVSARGSTP

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 29527; Mature: 29396

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPLPPGPPWPAFLSFLLHRCTARLRAGRVGRAGCRAAAVALAALSGGAGPAAAQAPASA
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PVPATQAQAPAAGMADRVIACTACHGREGRATQQGYFPRIAGKPAGYLYHQLLNFRDGRR
CCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SYPQMSYLLEHMTDDYLREIARHFSALDLPYAAPPPPQAPPATLERGRRLVREGDARRGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PACVQCHGGAMTGVQPAIPALVGLPRDYLNSQIGAWQTGQRRSQAPDCMARVARQLTAED
HHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHH
VSAISAWLAAQPVAGSGKPADAPAGPLPMPCGGVDVSARGSTP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PPLPPGPPWPAFLSFLLHRCTARLRAGRVGRAGCRAAAVALAALSGGAGPAAAQAPASA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PVPATQAQAPAAGMADRVIACTACHGREGRATQQGYFPRIAGKPAGYLYHQLLNFRDGRR
CCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SYPQMSYLLEHMTDDYLREIARHFSALDLPYAAPPPPQAPPATLERGRRLVREGDARRGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PACVQCHGGAMTGVQPAIPALVGLPRDYLNSQIGAWQTGQRRSQAPDCMARVARQLTAED
HHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHH
VSAISAWLAAQPVAGSGKPADAPAGPLPMPCGGVDVSARGSTP
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]