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The map label for this gene is adhB [H]

Identifier: 120612041

GI number: 120612041

Start: 3743165

End: 3744487

Strand: Reverse

Name: adhB [H]

Synonym: Aave_3387

Alternate gene names: 120612041

Gene position: 3744487-3743165 (Counterclockwise)

Preceding gene: 120612042

Following gene: 120612040

Centisome position: 69.95

GC content: 74.98

Gene sequence:

>1323_bases
ATGAGCGGGCCGCCATTGCGTGCACGGAGCTTCTGGCGGCGCTGGCCTGCGCTCGCAGGTATGGCCTTGCTGGCCGGCCT
GGCGGCCTGCGCGGTGCTCGTGGCCATGCTCAACCGCTGGGGCGAAGCCCCGCTGCCGCAGGACGACGGCCCGCCCGGGC
CCGCCACGCCGCAGGCCATCGCACGGGGCGAATACCTGGCCCGGGCCGGCAATTGCATGGCCTGCCATACCGAGCCGGGC
GGCGCCCCGTTCGCGGGCGGCCGCGGCATCGAGACGCCGTTCGGCACGGTGTACAGCACCAACCTCACGCCCGACCCCGA
CACCGGGCTGGGACGCTGGTCGGATGCCGCCTTCTGGCGCGCCCTGCACCATGGACGCTCGCGGGACGGGCGGCTGCTCT
ATCCCGCATTTCCGTATCCCAGCTACACGCATGTGACGCGGGAGGATGCCGACGCGATCCACGCCTATCTGCACAGCCTG
CCGCCGGTGCGCCAGGCCGCTCGCCCGCACGCGCTCGGCTTTCCCTACGGCACCCAGGCCGCGCTCGCCGTGTGGCGGGC
GCTGTTCTTCCGGCCCGGTGGCCTCGCGCCCGAGCCGGACCGGCCGGCCGACTGGAACCGCGGCCGCTACCTCGTGCAGG
GCCTGGGGCATTGCGCGGCCTGCCACAGCCCGCGCAATGCCCTGGGCGCCACGCGCGATGCCGGTGCCCTGCGCGGCGGG
CTCATCCCCGTGCAGAACTGGTATGCGCCGGCCCTGGACACGGTGCGCGAGGCCGGCGTGGCCGACTGGCCCGTGGACGA
GGTGGTCGCCCTGCTGCGCGACGGCACCGCGCCGCGCGGTACGGTGACCGGGCCCATGGCCGAGGTGGTCTTCCGCAGCA
CACAGTACCTGGACGACGCGGACCTGCGCGCCATTGCCACCTACCTGCGCGCGCTGCCCGCGCCGGAAGGTCCCGCGCCC
GCGGCATCGCCGCCGCCGTCCCGGCCCGTGATGGAGCGGGGCGGGGCGGTCTATGCCCGCCACTGCGCGCAGTGCCACGG
CGACGGCGGGCAGGGCCGACCGGGGGCATTCCCTCCACTGGCCGCCAACCGCGCGGTGCTGCTCGAATCGCCGGTGAACG
TGGTGCGCACCATCCTCCAGGGCGGCTATCCTCCGGTGACGCCCGGGAATCCGCGGCCCCACGGCATGCCGCCCTTCACC
CAGGTGCTGGGCGACGACGACGTGGCCGCCGTGGCCACTTTCGTGCGCAACGCCTGGGGCAACCGCGCGCCCGGGGTGGG
TACCATCGACGTGTACCGAGCACGGGAGCGCCGGGGGCGCTGA

Upstream 100 bases:

>100_bases
CCCAGCCGGTGGCCGGCAGCGGCAAGCCCGCGGACGCACCCGCCGGCCCGTTGCCCATGCCCTGCGGCGGCGTGGACGTG
TCCGCCAGGGGGAGCACGCC

Downstream 100 bases:

>100_bases
GTCGGCCCCTTCCTTCCCGTCCTCCGTCCCTTGCGCCTCTTTTTCCAAGCCTGTTGAAAAAATCCATGCCGGACACCATT
TCTCCACCAGCACCGCCTTC

Product: class I cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MSGPPLRARSFWRRWPALAGMALLAGLAACAVLVAMLNRWGEAPLPQDDGPPGPATPQAIARGEYLARAGNCMACHTEPG
GAPFAGGRGIETPFGTVYSTNLTPDPDTGLGRWSDAAFWRALHHGRSRDGRLLYPAFPYPSYTHVTREDADAIHAYLHSL
PPVRQAARPHALGFPYGTQAALAVWRALFFRPGGLAPEPDRPADWNRGRYLVQGLGHCAACHSPRNALGATRDAGALRGG
LIPVQNWYAPALDTVREAGVADWPVDEVVALLRDGTAPRGTVTGPMAEVVFRSTQYLDDADLRAIATYLRALPAPEGPAP
AASPPPSRPVMERGGAVYARHCAQCHGDGGQGRPGAFPPLAANRAVLLESPVNVVRTILQGGYPPVTPGNPRPHGMPPFT
QVLGDDDVAAVATFVRNAWGNRAPGVGTIDVYRARERRGR

Sequences:

>Translated_440_residues
MSGPPLRARSFWRRWPALAGMALLAGLAACAVLVAMLNRWGEAPLPQDDGPPGPATPQAIARGEYLARAGNCMACHTEPG
GAPFAGGRGIETPFGTVYSTNLTPDPDTGLGRWSDAAFWRALHHGRSRDGRLLYPAFPYPSYTHVTREDADAIHAYLHSL
PPVRQAARPHALGFPYGTQAALAVWRALFFRPGGLAPEPDRPADWNRGRYLVQGLGHCAACHSPRNALGATRDAGALRGG
LIPVQNWYAPALDTVREAGVADWPVDEVVALLRDGTAPRGTVTGPMAEVVFRSTQYLDDADLRAIATYLRALPAPEGPAP
AASPPPSRPVMERGGAVYARHCAQCHGDGGQGRPGAFPPLAANRAVLLESPVNVVRTILQGGYPPVTPGNPRPHGMPPFT
QVLGDDDVAAVATFVRNAWGNRAPGVGTIDVYRARERRGR
>Mature_439_residues
SGPPLRARSFWRRWPALAGMALLAGLAACAVLVAMLNRWGEAPLPQDDGPPGPATPQAIARGEYLARAGNCMACHTEPGG
APFAGGRGIETPFGTVYSTNLTPDPDTGLGRWSDAAFWRALHHGRSRDGRLLYPAFPYPSYTHVTREDADAIHAYLHSLP
PVRQAARPHALGFPYGTQAALAVWRALFFRPGGLAPEPDRPADWNRGRYLVQGLGHCAACHSPRNALGATRDAGALRGGL
IPVQNWYAPALDTVREAGVADWPVDEVVALLRDGTAPRGTVTGPMAEVVFRSTQYLDDADLRAIATYLRALPAPEGPAPA
ASPPPSRPVMERGGAVYARHCAQCHGDGGQGRPGAFPPLAANRAVLLESPVNVVRTILQGGYPPVTPGNPRPHGMPPFTQ
VLGDDDVAAVATFVRNAWGNRAPGVGTIDVYRARERRGR

Specific function: Dehydration of primary alcohols (exception:methanol) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 46842; Mature: 46710

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPPLRARSFWRRWPALAGMALLAGLAACAVLVAMLNRWGEAPLPQDDGPPGPATPQAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ARGEYLARAGNCMACHTEPGGAPFAGGRGIETPFGTVYSTNLTPDPDTGLGRWSDAAFWR
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
ALHHGRSRDGRLLYPAFPYPSYTHVTREDADAIHAYLHSLPPVRQAARPHALGFPYGTQA
HHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHH
ALAVWRALFFRPGGLAPEPDRPADWNRGRYLVQGLGHCAACHSPRNALGATRDAGALRGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCC
LIPVQNWYAPALDTVREAGVADWPVDEVVALLRDGTAPRGTVTGPMAEVVFRSTQYLDDA
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHH
DLRAIATYLRALPAPEGPAPAASPPPSRPVMERGGAVYARHCAQCHGDGGQGRPGAFPPL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
AANRAVLLESPVNVVRTILQGGYPPVTPGNPRPHGMPPFTQVLGDDDVAAVATFVRNAWG
CCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
NRAPGVGTIDVYRARERRGR
CCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SGPPLRARSFWRRWPALAGMALLAGLAACAVLVAMLNRWGEAPLPQDDGPPGPATPQAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ARGEYLARAGNCMACHTEPGGAPFAGGRGIETPFGTVYSTNLTPDPDTGLGRWSDAAFWR
HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
ALHHGRSRDGRLLYPAFPYPSYTHVTREDADAIHAYLHSLPPVRQAARPHALGFPYGTQA
HHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHH
ALAVWRALFFRPGGLAPEPDRPADWNRGRYLVQGLGHCAACHSPRNALGATRDAGALRGG
HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCC
LIPVQNWYAPALDTVREAGVADWPVDEVVALLRDGTAPRGTVTGPMAEVVFRSTQYLDDA
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHH
DLRAIATYLRALPAPEGPAPAASPPPSRPVMERGGAVYARHCAQCHGDGGQGRPGAFPPL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCC
AANRAVLLESPVNVVRTILQGGYPPVTPGNPRPHGMPPFTQVLGDDDVAAVATFVRNAWG
CCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCC
NRAPGVGTIDVYRARERRGR
CCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA