Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612040
Identifier: 120612040
GI number: 120612040
Start: 3742695
End: 3743099
Strand: Reverse
Name: 120612040
Synonym: Aave_3386
Alternate gene names: NA
Gene position: 3743099-3742695 (Counterclockwise)
Preceding gene: 120612041
Following gene: 120612039
Centisome position: 69.93
GC content: 72.84
Gene sequence:
>405_bases ATGCCGGACACCATTTCTCCACCAGCACCGCCTTCCGCCGGCGGCCCCCCCACGGCCCCGGGCTGGTGGGTGGTCTGCCT GTGCGCCGCCTGGTGTGGCGTCTGCCGTGAGTACGGCGCCGTCTTCGAGGCGCTGCGTGCCGCCCATCCGGAGGTCCGCT TCGAGTGGGTGGACGTGGAGGACGAGGAAGACCTGGCCGGTGACCTCGATGTGGAGACTTTCCCCACCGTGCTCGTGGCC GACGGCACCCATGCGCGCTTCCTCGGCCCCGTGCTGCCCCAGGCGGGCGTGCTCGCGCGCATGCTCGCCGCCCTGCGGGA GGAGGGGGATGCACCTCCGGTGGACGCCCAGGCACAGGCGGTATTCGAGCGCATCCGCCAGGCGCGCGCTGCGGCCGGAA GCTGA
Upstream 100 bases:
>100_bases ACGTGTACCGAGCACGGGAGCGCCGGGGGCGCTGAGTCGGCCCCTTCCTTCCCGTCCTCCGTCCCTTGCGCCTCTTTTTC CAAGCCTGTTGAAAAAATCC
Downstream 100 bases:
>100_bases CGCTGCGCCGCCACGTTTCTGGCACGCCTGCAATGCAAATTGCATGCCGCCGGCTTGGCAAAGCAACGCGTAACAGGCTA CAATAAGGGCTTCACGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin-Like Protein; Thioredoxin Domain-Containing Protein; Thioredoxin; Thioredoxin Protein; Thiol-Disulfide Isomerase And Thioredoxins; Thioredoxin Domain; Thiol-Disulfide Isomerase And Thioredoxins Family Protein; Thioredoxin-Disulfide Reductase
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPDTISPPAPPSAGGPPTAPGWWVVCLCAAWCGVCREYGAVFEALRAAHPEVRFEWVDVEDEEDLAGDLDVETFPTVLVA DGTHARFLGPVLPQAGVLARMLAALREEGDAPPVDAQAQAVFERIRQARAAAGS
Sequences:
>Translated_134_residues MPDTISPPAPPSAGGPPTAPGWWVVCLCAAWCGVCREYGAVFEALRAAHPEVRFEWVDVEDEEDLAGDLDVETFPTVLVA DGTHARFLGPVLPQAGVLARMLAALREEGDAPPVDAQAQAVFERIRQARAAAGS >Mature_133_residues PDTISPPAPPSAGGPPTAPGWWVVCLCAAWCGVCREYGAVFEALRAAHPEVRFEWVDVEDEEDLAGDLDVETFPTVLVAD GTHARFLGPVLPQAGVLARMLAALREEGDAPPVDAQAQAVFERIRQARAAAGS
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14191; Mature: 14060
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTISPPAPPSAGGPPTAPGWWVVCLCAAWCGVCREYGAVFEALRAAHPEVRFEWVDVE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC DEEDLAGDLDVETFPTVLVADGTHARFLGPVLPQAGVLARMLAALREEGDAPPVDAQAQA CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHH VFERIRQARAAAGS HHHHHHHHHHHCCC >Mature Secondary Structure PDTISPPAPPSAGGPPTAPGWWVVCLCAAWCGVCREYGAVFEALRAAHPEVRFEWVDVE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC DEEDLAGDLDVETFPTVLVADGTHARFLGPVLPQAGVLARMLAALREEGDAPPVDAQAQA CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHH VFERIRQARAAAGS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA