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The map label for this gene is rimP

Identifier: 120612039

GI number: 120612039

Start: 3741861

End: 3742469

Strand: Reverse

Name: rimP

Synonym: Aave_3385

Alternate gene names: 120612039

Gene position: 3742469-3741861 (Counterclockwise)

Preceding gene: 120612040

Following gene: 120612038

Centisome position: 69.92

GC content: 69.79

Gene sequence:

>609_bases
GTGGCATTGCAGCAGATCGTCGAACAAACCGTCGCGGGCCTGGGTTACGACCTGGTGGAGATCGAGCGCTCCGCCGGCGG
GCTGCTGCGCATCACCATCGATCTGCCCTGGCAGCCGCCCGTGGAAGGCGCCGCCTCCGATGCCGCCGCTCCGGCCGGCC
CCGAGGCATTCGTGACGGTCGAGGACTGCGAGAAGGTCACGCGCCAGCTGCAGTTCGCGCTGGAGGTCGATGGCGTGGAC
TACAAGCGCCTCGAGGTCTCCTCGCCGGGCATCGACCGCCCGCTGCGCCATGAACAGGATTTCCAGCGCTTCGCCGGCGA
GGTGATCGACATCACGCTCAAGGCGCCCATCGGCGATGCCGCCGCAGGCCAGGTCAACGCCAACCGCAAGAAATTCCGCG
GCACGCTCGAGCGCGCCGAGACCGGAGGCTGGCAGATCGTCTGGAGCGACGAGCCTCCCCCGAAGCCTGGCCAGAAGGTC
AGCAAGAAGCGGGTGCCCGCGCCGCTGCAGGCCCTGGGCTTCACGCTCGACGAGCTGCGCGACGCCCGGCTGGCGCCGAT
CGTGGATTTCAAGGGACGCGGGCCGAAAGGCGGGCCGGCCCCGGACTGA

Upstream 100 bases:

>100_bases
TTTTTTGGCCGTTCGCTTTTCTTCGAGCTCGAAGCTGTCGGGGGAGATTCCTCGGCGGTTATCGGGTTTTTTGCACTTCT
GGAACAGAGCTGAACGACAC

Downstream 100 bases:

>100_bases
ATCGGGCCGCAGCGGATTCGAAGCAAGGGCGGCCGCGCAGGGCGCGGGCCTTCAAGGGATTGAAAAATAGGAGAGTCGTC
GATGAATCGCGAACTGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTVEDCEKVTRQLQFALEVDGVD
YKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIGDAAAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKV
SKKRVPAPLQALGFTLDELRDARLAPIVDFKGRGPKGGPAPD

Sequences:

>Translated_202_residues
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTVEDCEKVTRQLQFALEVDGVD
YKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIGDAAAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKV
SKKRVPAPLQALGFTLDELRDARLAPIVDFKGRGPKGGPAPD
>Mature_201_residues
ALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTVEDCEKVTRQLQFALEVDGVDY
KRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIGDAAAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKVS
KKRVPAPLQALGFTLDELRDARLAPIVDFKGRGPKGGPAPD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_ACIAC (A1TSK5)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_971717.1
- ProteinModelPortal:   A1TSK5
- SMR:   A1TSK5
- STRING:   A1TSK5
- GeneID:   4667882
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_3385
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   MGYELVE
- PhylomeDB:   A1TSK5
- ProtClustDB:   PRK14642
- BioCyc:   AAVE397945:AAVE_3385-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 21827; Mature: 21696

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTV
CCHHHHHHHHHHHCCCHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEH
EDCEKVTRQLQFALEVDGVDYKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIGDA
HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCC
AAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKVSKKRVPAPLQALGFTLDELR
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCCHHHHC
DARLAPIVDFKGRGPKGGPAPD
CCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ALQQIVEQTVAGLGYDLVEIERSAGGLLRITIDLPWQPPVEGAASDAAAPAGPEAFVTV
CHHHHHHHHHHHCCCHHEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEH
EDCEKVTRQLQFALEVDGVDYKRLEVSSPGIDRPLRHEQDFQRFAGEVIDITLKAPIGDA
HHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCC
AAGQVNANRKKFRGTLERAETGGWQIVWSDEPPPKPGQKVSKKRVPAPLQALGFTLDELR
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCHHHHCCCHHHHC
DARLAPIVDFKGRGPKGGPAPD
CCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA