Click here to switch to the map view.

The map label for this gene is 120612004

Identifier: 120612004

GI number: 120612004

Start: 3704353

End: 3704679

Strand: Reverse

Name: 120612004

Synonym: Aave_3350

Alternate gene names: NA

Gene position: 3704679-3704353 (Counterclockwise)

Preceding gene: 120612007

Following gene: 120612003

Centisome position: 69.21

GC content: 63.61

Gene sequence:

>327_bases
GTGAACACCTTGACTCTTCCGGAGCCCATTGCCGCGTACTTCGCGGCGGAGCACAACCCTGAAGCCCTGGCGCATTGCTT
CACGACGCAAGCCGTCATGAAGGATGATGGCCGCACCTGCGCGGGTATCGACGCGATCAAGTCCTTCATGGCCGAGGCAT
CGGCCAAGTACCGTGCGACGAGCGTGCCGTTCGCCCTCGAGCGAGAGGACGGCTTCCAGCTCGTGCGCGCCAACGTCACC
GGCGATTTTCCTGGCAGCCCGATCGCTCTGTCCTACCGCTTTCGGCTTGAACGCGGGCTGATCGCCTCGCTGGAGATCAC
GGCATGA

Upstream 100 bases:

>100_bases
TGTATTCCTTTCTTCACAGCCTGTGCTGATTTTGTGGCATTCACTAAATTGTCTGCTGCGCGCATCCTGGAGTCTTCACT
GATCCCACGGAGCCACCACT

Downstream 100 bases:

>100_bases
GCTTCGACCTTCACCTGAAAGGCCTGCGGGCGGTGGTCACCGGCGGCACGCTGGGCCTTGGCGCCGCCGTTGTGAAAACC
CTTGCGGAGGCCGGCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNTLTLPEPIAAYFAAEHNPEALAHCFTTQAVMKDDGRTCAGIDAIKSFMAEASAKYRATSVPFALEREDGFQLVRANVT
GDFPGSPIALSYRFRLERGLIASLEITA

Sequences:

>Translated_108_residues
MNTLTLPEPIAAYFAAEHNPEALAHCFTTQAVMKDDGRTCAGIDAIKSFMAEASAKYRATSVPFALEREDGFQLVRANVT
GDFPGSPIALSYRFRLERGLIASLEITA
>Mature_108_residues
MNTLTLPEPIAAYFAAEHNPEALAHCFTTQAVMKDDGRTCAGIDAIKSFMAEASAKYRATSVPFALEREDGFQLVRANVT
GDFPGSPIALSYRFRLERGLIASLEITA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11726; Mature: 11726

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLTLPEPIAAYFAAEHNPEALAHCFTTQAVMKDDGRTCAGIDAIKSFMAEASAKYRAT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCEEC
SVPFALEREDGFQLVRANVTGDFPGSPIALSYRFRLERGLIASLEITA
CCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MNTLTLPEPIAAYFAAEHNPEALAHCFTTQAVMKDDGRTCAGIDAIKSFMAEASAKYRAT
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCEEC
SVPFALEREDGFQLVRANVTGDFPGSPIALSYRFRLERGLIASLEITA
CCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA