Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611992
Identifier: 120611992
GI number: 120611992
Start: 3688356
End: 3689042
Strand: Direct
Name: 120611992
Synonym: Aave_3337
Alternate gene names: NA
Gene position: 3688356-3689042 (Clockwise)
Preceding gene: 120611991
Following gene: 120612002
Centisome position: 68.91
GC content: 69.72
Gene sequence:
>687_bases ATGACCCCGTTCTCCGATCCTGCGGCCGTATCGGGCTACGCCGCGAGGACCGTGCGGATCGTGCCCGGCCTGCACGACCT GCACCGGATGGCCGGCGTTCTGCTGGCAGAACAAGCCCTTGCCGACGCCCGCATCCTGGTGCTCGGCGCCGGTGGCGGGC TGGAACTGAAGGCCTTCGCCGAGATGCAGCCGGCGTGGCGCTTCGACGGGGTCGATCCCTCCGCCGAGATGCTCGGCCTC GCCCGCACGACGCTCGGCCCGCTCGCGCCGCGCGTGCACCTGCATGAAGGCTATATCGACGGTGCGCCGGCAGGCCCTTT CGACGGCGCGACCTGCCTGCTGACGCTCCATTTCCTGCCGGCGAACGAGCGCCTGCGGACCCTGCAGCAGCTGCGCGCGC GGCTCAGGCCCGGAGCGCCCCTGGTCGTCGCGCACCACAGCTTTGACAGCGAAATTTCTGCAGGGCACCGCTGGCTCGCA CGCAATGCGGCATTCGCTGCGGCATCCGGCGTGCCCACGGCGCAGGCGGAAGGGAGCATCGCGGCGATCAGGCAAAGGCT GCCGGTGTTATCCCCGCAGCAGGACGCCGACCAGCTCCGCGAAGCGGGATTCACGGACATCGAGCTGTTCTATTGCGCTT TCACCTTCAAGGGGTGGGTGGCGCGTGCCGGGAGTGTTGCGGCCTGA
Upstream 100 bases:
>100_bases CCCTGGCCGTGGGCCACGGCGCCATGGCGGGCGCACAGGTCCATCGTTCGCTGGTGTGGCCCGAAACCCTCGCACCGCAG CCAGTGGAAGACCGCATGCG
Downstream 100 bases:
>100_bases AGCAACGGCCCGGCCGCGGAAGGGTGTGCATCGCTCGCGTCCCCATGGGTGACCGCGATGGAACGTACTCTGCCCGCAGC CGGTCAGCTTTTGGCCCCTC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Superfamily; Methyltransferase Domain-Containing Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTPFSDPAAVSGYAARTVRIVPGLHDLHRMAGVLLAEQALADARILVLGAGGGLELKAFAEMQPAWRFDGVDPSAEMLGL ARTTLGPLAPRVHLHEGYIDGAPAGPFDGATCLLTLHFLPANERLRTLQQLRARLRPGAPLVVAHHSFDSEISAGHRWLA RNAAFAAASGVPTAQAEGSIAAIRQRLPVLSPQQDADQLREAGFTDIELFYCAFTFKGWVARAGSVAA
Sequences:
>Translated_228_residues MTPFSDPAAVSGYAARTVRIVPGLHDLHRMAGVLLAEQALADARILVLGAGGGLELKAFAEMQPAWRFDGVDPSAEMLGL ARTTLGPLAPRVHLHEGYIDGAPAGPFDGATCLLTLHFLPANERLRTLQQLRARLRPGAPLVVAHHSFDSEISAGHRWLA RNAAFAAASGVPTAQAEGSIAAIRQRLPVLSPQQDADQLREAGFTDIELFYCAFTFKGWVARAGSVAA >Mature_227_residues TPFSDPAAVSGYAARTVRIVPGLHDLHRMAGVLLAEQALADARILVLGAGGGLELKAFAEMQPAWRFDGVDPSAEMLGLA RTTLGPLAPRVHLHEGYIDGAPAGPFDGATCLLTLHFLPANERLRTLQQLRARLRPGAPLVVAHHSFDSEISAGHRWLAR NAAFAAASGVPTAQAEGSIAAIRQRLPVLSPQQDADQLREAGFTDIELFYCAFTFKGWVARAGSVAA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24220; Mature: 24089
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFSDPAAVSGYAARTVRIVPGLHDLHRMAGVLLAEQALADARILVLGAGGGLELKAFA CCCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHH EMQPAWRFDGVDPSAEMLGLARTTLGPLAPRVHLHEGYIDGAPAGPFDGATCLLTLHFLP HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECC ANERLRTLQQLRARLRPGAPLVVAHHSFDSEISAGHRWLARNAAFAAASGVPTAQAEGSI CCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AAIRQRLPVLSPQQDADQLREAGFTDIELFYCAFTFKGWVARAGSVAA HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPFSDPAAVSGYAARTVRIVPGLHDLHRMAGVLLAEQALADARILVLGAGGGLELKAFA CCCCCCCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHH EMQPAWRFDGVDPSAEMLGLARTTLGPLAPRVHLHEGYIDGAPAGPFDGATCLLTLHFLP HCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECC ANERLRTLQQLRARLRPGAPLVVAHHSFDSEISAGHRWLARNAAFAAASGVPTAQAEGSI CCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH AAIRQRLPVLSPQQDADQLREAGFTDIELFYCAFTFKGWVARAGSVAA HHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA