Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611954
Identifier: 120611954
GI number: 120611954
Start: 3649634
End: 3650167
Strand: Direct
Name: 120611954
Synonym: Aave_3298
Alternate gene names: NA
Gene position: 3649634-3650167 (Clockwise)
Preceding gene: 120611953
Following gene: 120611955
Centisome position: 68.18
GC content: 70.6
Gene sequence:
>534_bases GTGCGTCGCTTCCTCGACCGCCTGTACCTCGCGGCAGGCGCCCTGGGCGCCGCCTGCGTCGCGCTGATCTGCGCGCTGAT GATCGCCCAGAGCGTCCTGCGCGAGGCCGGGGTGCGCACCGGCGCGCTGAACGACGTGGTCGCCTGGCTCTGCGCGGCGG CCGCCTTCTTCGCCATGGCCCATGCCTTCAAGCACGGCGATTTCGTGCGCGTCACCCTGCTGCTCGAAAGGCTCCCGCCG CGCCCGCGGCGCGCTTTCGAACTGGCGGCGCTCGCCATCGGCACGGTGGCGACGGCCTATCTCGCCTGGTCCGCCTGCCT GTTCACCCATGAGAGCTGGGAGTTCAATGACGTGGCCCAGGGCCTGCTGCCGCTGCCGATGTGGATCCCCCAGCTGAGCT TCGCGATCGGCTCGGTGCTGCTGCTGGTGGCGGTCCTGGACGAATTCCTCATCGTGCTGCGCGGCGGGACGCCGAGCTTC GTGCGCGCGGTCGAGGAGCGCCATGCACGTGGGGACTTCTCCGCCGACATCTGA
Upstream 100 bases:
>100_bases ATGCTGGCCGACTGGCTGCGCAAGGCGGGACCGGACGGCGAGGCCATCATCGCGGCCTACCGCAAGTCCGCACCGGTCGC CGCGGCCAAGTGAGGCGGCC
Downstream 100 bases:
>100_bases GGCGCACCGCAGGCGCTTCCTCCCCTCTCCCGCCGCCGTTTCCGAGAATCCAAGCTGCGCCCTGCGCGGCAGAAAGACCA GTGCCATGGACATCCTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRRFLDRLYLAAGALGAACVALICALMIAQSVLREAGVRTGALNDVVAWLCAAAAFFAMAHAFKHGDFVRVTLLLERLPP RPRRAFELAALAIGTVATAYLAWSACLFTHESWEFNDVAQGLLPLPMWIPQLSFAIGSVLLLVAVLDEFLIVLRGGTPSF VRAVEERHARGDFSADI
Sequences:
>Translated_177_residues MRRFLDRLYLAAGALGAACVALICALMIAQSVLREAGVRTGALNDVVAWLCAAAAFFAMAHAFKHGDFVRVTLLLERLPP RPRRAFELAALAIGTVATAYLAWSACLFTHESWEFNDVAQGLLPLPMWIPQLSFAIGSVLLLVAVLDEFLIVLRGGTPSF VRAVEERHARGDFSADI >Mature_177_residues MRRFLDRLYLAAGALGAACVALICALMIAQSVLREAGVRTGALNDVVAWLCAAAAFFAMAHAFKHGDFVRVTLLLERLPP RPRRAFELAALAIGTVATAYLAWSACLFTHESWEFNDVAQGLLPLPMWIPQLSFAIGSVLLLVAVLDEFLIVLRGGTPSF VRAVEERHARGDFSADI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19240; Mature: 19240
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLDRLYLAAGALGAACVALICALMIAQSVLREAGVRTGALNDVVAWLCAAAAFFAMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH HAFKHGDFVRVTLLLERLPPRPRRAFELAALAIGTVATAYLAWSACLFTHESWEFNDVAQ HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GLLPLPMWIPQLSFAIGSVLLLVAVLDEFLIVLRGGTPSFVRAVEERHARGDFSADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRFLDRLYLAAGALGAACVALICALMIAQSVLREAGVRTGALNDVVAWLCAAAAFFAMA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH HAFKHGDFVRVTLLLERLPPRPRRAFELAALAIGTVATAYLAWSACLFTHESWEFNDVAQ HHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH GLLPLPMWIPQLSFAIGSVLLLVAVLDEFLIVLRGGTPSFVRAVEERHARGDFSADI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA