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The map label for this gene is yiaN [C]

Identifier: 120611955

GI number: 120611955

Start: 3650253

End: 3651566

Strand: Direct

Name: yiaN [C]

Synonym: Aave_3299

Alternate gene names: 120611955

Gene position: 3650253-3651566 (Clockwise)

Preceding gene: 120611954

Following gene: 120611956

Centisome position: 68.19

GC content: 66.06

Gene sequence:

>1314_bases
ATGGACATCCTGATGGTGGGCGGCATCCTGTTGCTGCTGATGATCGTGCTGCTCGCGGGCGGCGTCTGGATCGCGATGAC
GCTGGCCATCTGCGGCTGGGTCGGGCAGGCCTTCTTCACCAGCACGCAGCCCGGCAAGAACCTGTTCTCCGCCTTCTGGG
AGAGCAACGCGAGCTGGGAACTGGCCGCGCTGCCACTTTTCATCTGGATGGGAGAGATCCTGTTCCGCACGCGGCTGAGC
GAGGAGATGTTCGAAGGGCTGCGGCCCTGGCTCAACCGGGTGCCGGGCCGGCTGATGCACACCACCATCCTGGGCTGCGG
CATCTTCGGCTCGGTGTCGGGCTCCTCGGCCGCCACCTGCGCCACCATCAGCAAGGTCGCCCTGCCGGAACTGCTGCGGC
GCGGCTACGACGAGCGCCTGGCGCTCGGCTCGCTGGCCACGGCCGGCACGCTGGGCATCCTCATCCCGCCCTCCATCACC
ATGGTGGTGTACGCGGTGGCCGCCGATGCCTCCATCATCCGGATCTTCCTGGCGGGCTTCCTGCCGGGGCTGCTGCTCAT
GCTGCTCTTCTCGGGCTATATCGGCTGGTGGAGCCTGCGGCATCCCGACCGGGTGCCGGCGGCCGACCCGCCCACCACGC
TGCGCCAGAAGATAAGGCGGTCGGGCAATCTCATTCCCGTCACGGCGCTGATCGTGTTCATCGTCTGGGTGCTGGTCGCG
GGCTACGCCACGGCCACCGAATGCGCGGCCTTCGGCGTGGCGGGATCCCTGGGGCTGGCCCTCTGGAGCCGGTCGCTGAC
CTGGCGGAATTTTTCCGAAGGACTGATGGGCGCGACACGCACCAGCTGCATGATCATGTTCATCCTCGCGGGCGCGGCCT
TCCTCACCAAGACCATGGCCTTCACCGGCATACCGCGCGAGCTGGCCGAATGGGTCGAATCCATGCACCTGCCGCCCTAC
GCGCTGATCGCGGTGCTGACACTGGTCTATCTGGTGCTGGGCACCGCGCTCGACGGCATCAGCATGATCGTGCTCACCAG
CGCGGTGGTACTGCCGATGATCCAGAAAGCCGGCTTCGACCTGGTGTGGTTCGGCATCTTCATCGTGCTGCTGGTGGAGA
TCGCCGAGGTCACGCCGCCGGTAGGGTTCAACCTCTTCGTGCTGCAGAACATGACGGGCAAGGACAGCAATACCATCGCC
CGCGCTGCCATCCCGTTCTTCGTATGCCTGGTGGTTTGCATCGCGCTCATCACCCTCTTCCCGCAGATCGTCACCGTGCT
GCCGGACCTGGTGATGGGCAAGGACGGAGGGTGA

Upstream 100 bases:

>100_bases
TCCGCCGACATCTGAGGCGCACCGCAGGCGCTTCCTCCCCTCTCCCGCCGCCGTTTCCGAGAATCCAAGCTGCGCCCTGC
GCGGCAGAAAGACCAGTGCC

Downstream 100 bases:

>100_bases
ACCCCGGGCGCGCCCGCGCGTGCTGACATACTCCGGGGCATGCTGCTCAATATCGCCGTCATCTGCCTGGCTGCCTGCGT
CGGCGCCCTGATGCGCTGGG

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MDILMVGGILLLLMIVLLAGGVWIAMTLAICGWVGQAFFTSTQPGKNLFSAFWESNASWELAALPLFIWMGEILFRTRLS
EEMFEGLRPWLNRVPGRLMHTTILGCGIFGSVSGSSAATCATISKVALPELLRRGYDERLALGSLATAGTLGILIPPSIT
MVVYAVAADASIIRIFLAGFLPGLLLMLLFSGYIGWWSLRHPDRVPAADPPTTLRQKIRRSGNLIPVTALIVFIVWVLVA
GYATATECAAFGVAGSLGLALWSRSLTWRNFSEGLMGATRTSCMIMFILAGAAFLTKTMAFTGIPRELAEWVESMHLPPY
ALIAVLTLVYLVLGTALDGISMIVLTSAVVLPMIQKAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQNMTGKDSNTIA
RAAIPFFVCLVVCIALITLFPQIVTVLPDLVMGKDGG

Sequences:

>Translated_437_residues
MDILMVGGILLLLMIVLLAGGVWIAMTLAICGWVGQAFFTSTQPGKNLFSAFWESNASWELAALPLFIWMGEILFRTRLS
EEMFEGLRPWLNRVPGRLMHTTILGCGIFGSVSGSSAATCATISKVALPELLRRGYDERLALGSLATAGTLGILIPPSIT
MVVYAVAADASIIRIFLAGFLPGLLLMLLFSGYIGWWSLRHPDRVPAADPPTTLRQKIRRSGNLIPVTALIVFIVWVLVA
GYATATECAAFGVAGSLGLALWSRSLTWRNFSEGLMGATRTSCMIMFILAGAAFLTKTMAFTGIPRELAEWVESMHLPPY
ALIAVLTLVYLVLGTALDGISMIVLTSAVVLPMIQKAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQNMTGKDSNTIA
RAAIPFFVCLVVCIALITLFPQIVTVLPDLVMGKDGG
>Mature_437_residues
MDILMVGGILLLLMIVLLAGGVWIAMTLAICGWVGQAFFTSTQPGKNLFSAFWESNASWELAALPLFIWMGEILFRTRLS
EEMFEGLRPWLNRVPGRLMHTTILGCGIFGSVSGSSAATCATISKVALPELLRRGYDERLALGSLATAGTLGILIPPSIT
MVVYAVAADASIIRIFLAGFLPGLLLMLLFSGYIGWWSLRHPDRVPAADPPTTLRQKIRRSGNLIPVTALIVFIVWVLVA
GYATATECAAFGVAGSLGLALWSRSLTWRNFSEGLMGATRTSCMIMFILAGAAFLTKTMAFTGIPRELAEWVESMHLPPY
ALIAVLTLVYLVLGTALDGISMIVLTSAVVLPMIQKAGFDLVWFGIFIVLLVEIAEVTPPVGFNLFVLQNMTGKDSNTIA
RAAIPFFVCLVVCIALITLFPQIVTVLPDLVMGKDGG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=373, Percent_Identity=25.7372654155496, Blast_Score=99, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 47123; Mature: 47123

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILMVGGILLLLMIVLLAGGVWIAMTLAICGWVGQAFFTSTQPGKNLFSAFWESNASWE
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCH
LAALPLFIWMGEILFRTRLSEEMFEGLRPWLNRVPGRLMHTTILGCGIFGSVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
ATISKVALPELLRRGYDERLALGSLATAGTLGILIPPSITMVVYAVAADASIIRIFLAGF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHH
LPGLLLMLLFSGYIGWWSLRHPDRVPAADPPTTLRQKIRRSGNLIPVTALIVFIVWVLVA
HHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHH
GYATATECAAFGVAGSLGLALWSRSLTWRNFSEGLMGATRTSCMIMFILAGAAFLTKTMA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTGIPRELAEWVESMHLPPYALIAVLTLVYLVLGTALDGISMIVLTSAVVLPMIQKAGFD
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVWFGIFIVLLVEIAEVTPPVGFNLFVLQNMTGKDSNTIARAAIPFFVCLVVCIALITLF
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PQIVTVLPDLVMGKDGG
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDILMVGGILLLLMIVLLAGGVWIAMTLAICGWVGQAFFTSTQPGKNLFSAFWESNASWE
CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCH
LAALPLFIWMGEILFRTRLSEEMFEGLRPWLNRVPGRLMHTTILGCGIFGSVSGSSAATC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHH
ATISKVALPELLRRGYDERLALGSLATAGTLGILIPPSITMVVYAVAADASIIRIFLAGF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHH
LPGLLLMLLFSGYIGWWSLRHPDRVPAADPPTTLRQKIRRSGNLIPVTALIVFIVWVLVA
HHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHH
GYATATECAAFGVAGSLGLALWSRSLTWRNFSEGLMGATRTSCMIMFILAGAAFLTKTMA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTGIPRELAEWVESMHLPPYALIAVLTLVYLVLGTALDGISMIVLTSAVVLPMIQKAGFD
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LVWFGIFIVLLVEIAEVTPPVGFNLFVLQNMTGKDSNTIARAAIPFFVCLVVCIALITLF
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PQIVTVLPDLVMGKDGG
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]