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The map label for this gene is phaC [H]

Identifier: 120611946

GI number: 120611946

Start: 3639374

End: 3639739

Strand: Direct

Name: phaC [H]

Synonym: Aave_3290

Alternate gene names: 120611946

Gene position: 3639374-3639739 (Clockwise)

Preceding gene: 120611945

Following gene: 120611947

Centisome position: 67.99

GC content: 66.39

Gene sequence:

>366_bases
ATGGAAATCGTTCTGGCCGTCGCGATCGGCGTGCTCGCGGGATCGGGTGTGTGGCTGGTGCTGCGCCCCCGTACCTACCA
GGTCATCATGGGACTGGCGCTGCTGTCGTACGCGGTGAACCTGTTCATCTTCAGCATGGGCCGCCTGGGCCTCGCCGTGG
GCAAGGAGCCCGTGCTGGTGGAGGGCGTGGCGAAGGATCTGCAGCACTATGCGGACCCGATGCCGCAGGCGCTGGTGCTG
ACGGCCATCGTGATCGGCTTCGCCATGACGGCGCTGTTCCTGGTGGTGCTGCTCGCCTCGCGCGGCATGTCGGGCACCGA
CCATGTGGACGGATCGCATTCGCGCGACGTGCAGGAGATGCCATGA

Upstream 100 bases:

>100_bases
AGTCCGCGCAGGCGGCCCAGGCTGCCGAGAGCAAGCTGCCGGTGGCGCTGGACGGCGCCCGCGGCGGAGCCGCCGCCACG
GCACCCGGAGGAACCCCTTG

Downstream 100 bases:

>100_bases
CCGCCGCACGCGCCTTGCATCGCCACAGCCGCCGCACGGCCGGGAGCCGCCGATGAGTGCGGCCGCCCAGTTCTCGCAAG
GGATGTCGGCGCTCATGCCG

Product: putative monovalent cation/H+ antiporter subunit C

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein C; Pha system subunit C [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MEIVLAVAIGVLAGSGVWLVLRPRTYQVIMGLALLSYAVNLFIFSMGRLGLAVGKEPVLVEGVAKDLQHYADPMPQALVL
TAIVIGFAMTALFLVVLLASRGMSGTDHVDGSHSRDVQEMP

Sequences:

>Translated_121_residues
MEIVLAVAIGVLAGSGVWLVLRPRTYQVIMGLALLSYAVNLFIFSMGRLGLAVGKEPVLVEGVAKDLQHYADPMPQALVL
TAIVIGFAMTALFLVVLLASRGMSGTDHVDGSHSRDVQEMP
>Mature_121_residues
MEIVLAVAIGVLAGSGVWLVLRPRTYQVIMGLALLSYAVNLFIFSMGRLGLAVGKEPVLVEGVAKDLQHYADPMPQALVL
TAIVIGFAMTALFLVVLLASRGMSGTDHVDGSHSRDVQEMP

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG1006

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006673
- InterPro:   IPR001133 [H]

Pfam domain/function: PF00420 Oxidored_q2 [H]

EC number: NA

Molecular weight: Translated: 12878; Mature: 12878

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVLAVAIGVLAGSGVWLVLRPRTYQVIMGLALLSYAVNLFIFSMGRLGLAVGKEPVLV
CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EGVAKDLQHYADPMPQALVLTAIVIGFAMTALFLVVLLASRGMSGTDHVDGSHSRDVQEM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
P
C
>Mature Secondary Structure
MEIVLAVAIGVLAGSGVWLVLRPRTYQVIMGLALLSYAVNLFIFSMGRLGLAVGKEPVLV
CHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
EGVAKDLQHYADPMPQALVLTAIVIGFAMTALFLVVLLASRGMSGTDHVDGSHSRDVQEM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]