Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611924
Identifier: 120611924
GI number: 120611924
Start: 3611962
End: 3612798
Strand: Direct
Name: 120611924
Synonym: Aave_3268
Alternate gene names: NA
Gene position: 3611962-3612798 (Clockwise)
Preceding gene: 120611922
Following gene: 120611930
Centisome position: 67.48
GC content: 71.8
Gene sequence:
>837_bases ATGCAATTCCCCCTCTCGCGCCCCCTGCCCGCTTCAGGCGTGCGCCGCCGCACCCTGGGTGCGCTGCTGGGCGCCGCCGC CCTCACGCTGGGCCTGGCCCTGGGCGCGACCCCGTCGGCCGTGCAGGCAGCGGAAATCCGCGTCGTCACCTCCGGCGGTT TCTCGGCCGCCTACGACCAGCTCGTGCCGCTCTACGAGCAGGCCACGGGCCACAAGGTCACCACGGCGCGCGGCGCCTCC ATCGGCAACGCGCCGGACTCGATCCCCAGCCGCATGGCGCGGGGCGAGCAGTTCGACATCGTGATCCTGGCCGACTCGGC GCTGGACAAGCTGATCGAGCAGGGCAAGGTGCAGGCGGGCAGCCGCGTGGACCTCGCCCGCTCCATGATCGGCATGAGCG TGCGCAAGGGCACGCCCCGCCCGGACATCAGCACCGTGGATGCCCTTCGGCAGACCCTGCTGAACGCCAGGTCGATCGCC TACTCGGCCAGCGCCAGCGGCACCTACCTGTCCACCGAGCTGTTCCAGCGCCTGGGCGTGGCCGAGCAGATCAAGGACAA GGCCAAGAAGATCTACAGCGAGCGCGTCGGCGCGGTCGTGCTGCGCGGCGATGCCGAGATCGGCTTCCAGCAGGTGAGCG AGCTGCTGCCCTTCAAGGAGCTGGATTTCGTGGGCCCGCTGCCGGACGAAGTGCAGCAGCGCGTGTTCTTCTCGGCCGGC GTGGCGACCGGCTCGCCGGAGCCCGAAGCCGCGCGCCACCTGATCCGCTTCCTGGCGGCACCCGCGGCCGCGGCCATCGT GCGCAGCACCGGCATGGAGCCCGCTGCGGCCCGCTGA
Upstream 100 bases:
>100_bases TGCAGGCCTGGGGATGAGACACATCGGCTGCGGATGCTGGTTGCCGGGATGACGCAGGCAGGCGCGACGCATTCACACCA AAACATAACGGAGACACACC
Downstream 100 bases:
>100_bases TCGCGCCGCCGGTTTTTTCGGAGCCCACGCCCGAGAGCGCTCCGGGCCGACGGGAGACGCGCGCATCCTGCGCCGGCTAC ATCTTGTAGTTCAGCGAGAC
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MQFPLSRPLPASGVRRRTLGALLGAAALTLGLALGATPSAVQAAEIRVVTSGGFSAAYDQLVPLYEQATGHKVTTARGAS IGNAPDSIPSRMARGEQFDIVILADSALDKLIEQGKVQAGSRVDLARSMIGMSVRKGTPRPDISTVDALRQTLLNARSIA YSASASGTYLSTELFQRLGVAEQIKDKAKKIYSERVGAVVLRGDAEIGFQQVSELLPFKELDFVGPLPDEVQQRVFFSAG VATGSPEPEAARHLIRFLAAPAAAAIVRSTGMEPAAAR
Sequences:
>Translated_278_residues MQFPLSRPLPASGVRRRTLGALLGAAALTLGLALGATPSAVQAAEIRVVTSGGFSAAYDQLVPLYEQATGHKVTTARGAS IGNAPDSIPSRMARGEQFDIVILADSALDKLIEQGKVQAGSRVDLARSMIGMSVRKGTPRPDISTVDALRQTLLNARSIA YSASASGTYLSTELFQRLGVAEQIKDKAKKIYSERVGAVVLRGDAEIGFQQVSELLPFKELDFVGPLPDEVQQRVFFSAG VATGSPEPEAARHLIRFLAAPAAAAIVRSTGMEPAAAR >Mature_278_residues MQFPLSRPLPASGVRRRTLGALLGAAALTLGLALGATPSAVQAAEIRVVTSGGFSAAYDQLVPLYEQATGHKVTTARGAS IGNAPDSIPSRMARGEQFDIVILADSALDKLIEQGKVQAGSRVDLARSMIGMSVRKGTPRPDISTVDALRQTLLNARSIA YSASASGTYLSTELFQRLGVAEQIKDKAKKIYSERVGAVVLRGDAEIGFQQVSELLPFKELDFVGPLPDEVQQRVFFSAG VATGSPEPEAARHLIRFLAAPAAAAIVRSTGMEPAAAR
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29269; Mature: 29269
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFPLSRPLPASGVRRRTLGALLGAAALTLGLALGATPSAVQAAEIRVVTSGGFSAAYDQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCHHHHHH LVPLYEQATGHKVTTARGASIGNAPDSIPSRMARGEQFDIVILADSALDKLIEQGKVQAG HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCC SRVDLARSMIGMSVRKGTPRPDISTVDALRQTLLNARSIAYSASASGTYLSTELFQRLGV CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCH AEQIKDKAKKIYSERVGAVVLRGDAEIGFQQVSELLPFKELDFVGPLPDEVQQRVFFSAG HHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHC VATGSPEPEAARHLIRFLAAPAAAAIVRSTGMEPAAAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQFPLSRPLPASGVRRRTLGALLGAAALTLGLALGATPSAVQAAEIRVVTSGGFSAAYDQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCHHHHHH LVPLYEQATGHKVTTARGASIGNAPDSIPSRMARGEQFDIVILADSALDKLIEQGKVQAG HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECHHHHHHHHHCCCCCC SRVDLARSMIGMSVRKGTPRPDISTVDALRQTLLNARSIAYSASASGTYLSTELFQRLGV CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCH AEQIKDKAKKIYSERVGAVVLRGDAEIGFQQVSELLPFKELDFVGPLPDEVQQRVFFSAG HHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHC VATGSPEPEAARHLIRFLAAPAAAAIVRSTGMEPAAAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA