| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is fabI [H]
Identifier: 120611913
GI number: 120611913
Start: 3598750
End: 3599547
Strand: Direct
Name: fabI [H]
Synonym: Aave_3255
Alternate gene names: 120611913
Gene position: 3598750-3599547 (Clockwise)
Preceding gene: 120611908
Following gene: 120611916
Centisome position: 67.23
GC content: 66.79
Gene sequence:
>798_bases ATGGGTTTCCTGACCGGCAAGAAGCTGCTCATCACCGGCGTGCTGTCCAACCGTTCCATCGCCTACGGCATCGCCAAGGC CTGCCACGCGCAGGGTGCCGAGCTGGCCTTCAGCTACGTGGGCGAGCGCTTCAAGGACCGCATCACCGAATTCGCGGCCG AATTCGATTCCAGGCTGGTCTTCGATTGCGACGTGGCGAGCGACGAGCAGATCGAGCGCATGTTCGCCGACCTGTCGGCC ACCTGGCCGAAGTTCGACGGCTTCGTGCACAGCATCGGTTTCGCTCCGCGTGAAGCCATCGCTGGCGACTTCCTCGAAGG CCTGTCGCGCGAATCCTTCCGCATCGCGCACGACATCAGCGCCTACAGCTTCCCCGCCATGGCCAAGGCCGCCCTGCCCT ACCTGAACGACAAGGCCGCCGTGCTCACCCTGAGCTACCTGGGCGCACTGCGCGCGGTGCCCAACTACAACACCATGGGC CTGGCCAAGGCCAGCCTGGAAGCCAGCGTGCGCTACCTGGCCGAATCCCTGGGCCCCAGGGGCATGCGCGCCAACGGCAT CAGCGCAGGCCCGATCAAGACACTGGCCGCCAGCGGCATCAAGGACTTCGGCAAGCTGCTGGGCACCGTGGCCGACGCCT CGCCCCTGCGCCGCAACGTGACCATCGAGGACGTGGGCAATGCCGCGGCCTTCCTGCTGTCGGACCTCGCCAGCGGCGTG ACGGCGGAAATCATGTACGTGGACGGCGGCTTCAGCCAGACCGGCGGCATCAGCCGCGACAGCGCCAACCTGGCCTGA
Upstream 100 bases:
>100_bases GATTTTCCCGGTCGGATTCCCGGCCGCCGCATCTTTCCGCCACGGGCCGCGCCGCGCCCCTCCGGCATTCCACCCCTACC GCATTCACTGGAGAACAACA
Downstream 100 bases:
>100_bases TCGCCAGGCCGCGTCGGCGGGCGACCGAACCGATGCACGGACAGCCAAAGCCGCAAGGTCCCGCCATGGGGCGGCCTCGC GGCTTTCGCACATCCGGCCA
Product: enoyl-[acyl-carrier-protein] reductase [NADH]
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAAEFDSRLVFDCDVASDEQIERMFADLSA TWPKFDGFVHSIGFAPREAIAGDFLEGLSRESFRIAHDISAYSFPAMAKAALPYLNDKAAVLTLSYLGALRAVPNYNTMG LAKASLEASVRYLAESLGPRGMRANGISAGPIKTLAASGIKDFGKLLGTVADASPLRRNVTIEDVGNAAAFLLSDLASGV TAEIMYVDGGFSQTGGISRDSANLA
Sequences:
>Translated_265_residues MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAAEFDSRLVFDCDVASDEQIERMFADLSA TWPKFDGFVHSIGFAPREAIAGDFLEGLSRESFRIAHDISAYSFPAMAKAALPYLNDKAAVLTLSYLGALRAVPNYNTMG LAKASLEASVRYLAESLGPRGMRANGISAGPIKTLAASGIKDFGKLLGTVADASPLRRNVTIEDVGNAAAFLLSDLASGV TAEIMYVDGGFSQTGGISRDSANLA >Mature_264_residues GFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAAEFDSRLVFDCDVASDEQIERMFADLSAT WPKFDGFVHSIGFAPREAIAGDFLEGLSRESFRIAHDISAYSFPAMAKAALPYLNDKAAVLTLSYLGALRAVPNYNTMGL AKASLEASVRYLAESLGPRGMRANGISAGPIKTLAASGIKDFGKLLGTVADASPLRRNVTIEDVGNAAAFLLSDLASGVT AEIMYVDGGFSQTGGISRDSANLA
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=252, Percent_Identity=63.0952380952381, Blast_Score=339, Evalue=9e-95, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=28.1853281853282, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787905, Length=258, Percent_Identity=26.7441860465116, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI115534694, Length=257, Percent_Identity=25.6809338521401, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=219, Percent_Identity=30.5936073059361, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=25.6809338521401, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 28113; Mature: 27982
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAAEFDSRLV CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE FDCDVASDEQIERMFADLSATWPKFDGFVHSIGFAPREAIAGDFLEGLSRESFRIAHDIS EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC AYSFPAMAKAALPYLNDKAAVLTLSYLGALRAVPNYNTMGLAKASLEASVRYLAESLGPR HHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GMRANGISAGPIKTLAASGIKDFGKLLGTVADASPLRRNVTIEDVGNAAAFLLSDLASGV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC TAEIMYVDGGFSQTGGISRDSANLA EEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure GFLTGKKLLITGVLSNRSIAYGIAKACHAQGAELAFSYVGERFKDRITEFAAEFDSRLV CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE FDCDVASDEQIERMFADLSATWPKFDGFVHSIGFAPREAIAGDFLEGLSRESFRIAHDIS EEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC AYSFPAMAKAALPYLNDKAAVLTLSYLGALRAVPNYNTMGLAKASLEASVRYLAESLGPR HHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC GMRANGISAGPIKTLAASGIKDFGKLLGTVADASPLRRNVTIEDVGNAAAFLLSDLASGV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHCCC TAEIMYVDGGFSQTGGISRDSANLA EEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]