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The map label for this gene is ydiK [C]

Identifier: 120611907

GI number: 120611907

Start: 3588974

End: 3590026

Strand: Direct

Name: ydiK [C]

Synonym: Aave_3249

Alternate gene names: 120611907

Gene position: 3588974-3590026 (Clockwise)

Preceding gene: 120611901

Following gene: 120611908

Centisome position: 67.05

GC content: 68.19

Gene sequence:

>1053_bases
ATGAAGACCACCCTGCTGCAGAACCGCACGTTCATCGCCCTGCTGATCGCCGTCAGCCTGGCCTTCCTGGCCATCCTCTG
GCCATTCCACGGCGCGGTTTTCTGGGGGGTCATCCTCGCCATCCTCTTTGCCCCCATGCACCGCCGGCTGCTGCGGCTCA
TGCCGCGCCGCACGAATCTGGCAGCCCTGTGCACGCTCACGCTGTGCCTGCTGGTTGTGATCCTGCCGGTGACCCTGATC
ACCGTCTCCCTGGTCCAGGAAGCCAGCCTGATCTACGAGCGGATCCGCTCCGGGCAGCTGGACTTCACGGCCTACTTCCA
CCAGGTGATGGCGGCGATGCCTTCCTGGGCGATGCAGATCCTCGACCGGCTCGACCTGACCACGGCGTCCGAACTGCAGG
CGCGGCTGTCGTCCGTCACCGTGCAGGCCACGCAATTCGTGGGCGGCAAGGCGATCGACTTCGGGCAGAACACGCTGCAG
TTCGTGGTGAGCTTCGGCATCATGCTCTACCTGCTGTTCTTCCTGCTGCGCGACGGCCCGGCCCTGGCAGCGCGCATCCG
CGAGGCCACGCCCCTGGACGAAGGCCACAAGCGCCAGCTCGCCACCAAGTTCACCACCGTGATCCGCGCCACCGTCAAGG
GCAACATCGCGGTGGCCGCGGCCCAGGGCGCCCTGGGCGGGCTGGCCTTCTGGTTCCTGGCCATCCAGGCCCCCGTGCTC
TGGGGCGTGCTCATGGCCTTCCTGTCGCTGCTGCCGGCCGTCGGCGCCGGCCTGATCTGGGCCCCCGTGGCCCTGTACCT
GCTGGCCACCGGTGCCGTCTGGCAGGGCGTGGGCCTCGCGGCCTTCGGCATCGGCGTGATCGGACTCGTGGACAACGTCC
TGCGCCCGGTGCTGGTGGGCAAGGACACCAAGATGCCCGACTACGTCGTCCTCATCTCCACGCTGGGCGGCATGTCCCTC
TTCGGGCTCACGGGCTTCGTGATCGGCCCCGTCATCGCGGCGCTGTTCATCGCGACCTGGGACCTGTTTGCACCGCACAC
CCACGGGCGGTGA

Upstream 100 bases:

>100_bases
TTGTGCCACCGATCACGGGCAGCGCCTAACCGGCCGTGTCCCACAGGGCGGAGCGGCCGTCCTCGCGTACATTTGCGCCA
GTGTCCGCCACCGTCGAGCC

Downstream 100 bases:

>100_bases
CAATACGGGGGAGCCCGCCGCGCCGCGGGCCACCCTCCCCCCTGCCGTTTCCGCGCGGACCCGTGCCGCCCGCTGCACAT
GTCCATGCGCCTGACCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNLAALCTLTLCLLVVILPVTLI
TVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPSWAMQILDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQ
FVVSFGIMLYLLFFLLRDGPALAARIREATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAPVL
WGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVLVGKDTKMPDYVVLISTLGGMSL
FGLTGFVIGPVIAALFIATWDLFAPHTHGR

Sequences:

>Translated_350_residues
MKTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNLAALCTLTLCLLVVILPVTLI
TVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPSWAMQILDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQ
FVVSFGIMLYLLFFLLRDGPALAARIREATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAPVL
WGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVLVGKDTKMPDYVVLISTLGGMSL
FGLTGFVIGPVIAALFIATWDLFAPHTHGR
>Mature_350_residues
MKTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNLAALCTLTLCLLVVILPVTLI
TVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPSWAMQILDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQ
FVVSFGIMLYLLFFLLRDGPALAARIREATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAPVL
WGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVLVGKDTKMPDYVVLISTLGGMSL
FGLTGFVIGPVIAALFIATWDLFAPHTHGR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=337, Percent_Identity=28.486646884273, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37853; Mature: 37853

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNL
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AALCTLTLCLLVVILPVTLITVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPSWAMQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQFVVSFGIMLYLLFFLLRDGP
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ALAARIREATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAPVL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH
WGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVLVG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDYVVLISTLGGMSLFGLTGFVIGPVIAALFIATWDLFAPHTHGR
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTTLLQNRTFIALLIAVSLAFLAILWPFHGAVFWGVILAILFAPMHRRLLRLMPRRTNL
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AALCTLTLCLLVVILPVTLITVSLVQEASLIYERIRSGQLDFTAYFHQVMAAMPSWAMQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
LDRLDLTTASELQARLSSVTVQATQFVGGKAIDFGQNTLQFVVSFGIMLYLLFFLLRDGP
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ALAARIREATPLDEGHKRQLATKFTTVIRATVKGNIAVAAAQGALGGLAFWFLAIQAPVL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHH
WGVLMAFLSLLPAVGAGLIWAPVALYLLATGAVWQGVGLAAFGIGVIGLVDNVLRPVLVG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
KDTKMPDYVVLISTLGGMSLFGLTGFVIGPVIAALFIATWDLFAPHTHGR
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]