Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611902
Identifier: 120611902
GI number: 120611902
Start: 3580840
End: 3581592
Strand: Reverse
Name: 120611902
Synonym: Aave_3244
Alternate gene names: NA
Gene position: 3581592-3580840 (Counterclockwise)
Preceding gene: 120611903
Following gene: 120611900
Centisome position: 66.91
GC content: 75.3
Gene sequence:
>753_bases ATGACGAACTCTTCACTGCCTTCCCTTCTCCGCGCCCTCGCCCTGGCGGTGTCCTGGGCGCTGCTGACCGTTGCCGGCCC GGTGGCGGCGGCCGCAGCCCAGGGCGATGCCGAGCAGGCCCGTGCCGCGTTCGAGGCCGCGCAGGCGGCCAGGACCGCGG AGCGCGCGCGCATCCAGGAAGAGCGGGCCGCGCTCGATGCGCGCAAGAAGAAGGAGGAGGCGGTCTGCTACCAGCGCTTT TCCGTGGAATCCTGCCTGGGAACGGTGCGCTCCCAGGTGCGCGATGCGGAGGCGGTGCTGCGCAAGCGGGAGGTGGAACT GAACAACGCGGAGCGGCGCGAGAAAGCCGCCCTGCGGATGCAGTCCATCGAGCAGAAGCAGGCCGAGCAGCGCCAGAAGA TCGAAAGCGGGGAACGCCCGGCGCCCATGCGCGCCGAGTCGCGGTCCCGGGCCCAGCCCGAGGACCGCGCGCAGCGCGAG GAAGAGGCGCGCTCGCGTGCGGCCCAGCAGCGCGCGCGCGAGGAATCCCACCGCAACGCCGAGGCCGAGCGCGCCGCCAC GCAGCCGGCCCGTTCCGCCGAGGCGCGGGCGCGCTACGAGGCCAAGCAGCGGGCCGCCCGGGAGCGCCGGGAAAAGCGCG AACGCGCCAATGCCGAGGCCGCGGCCTCGGGCCGCAAGCCCGCGGCTCCCTTGCCGGACCCGGCCGATCCCGCCCCCCCG TCGGCGCCTGCCGGTTCCGCGCCGGCCCGCTGA
Upstream 100 bases:
>100_bases TATCCCGCCTCAATGAAATGCAGTCCAGGGAGTTCCTGGCGCTCGAGCGCCGGGTGGTGGACACGGGGCTGACCTGAAGT CGCCCGCAAAGGATTTACGC
Downstream 100 bases:
>100_bases CCGGGCAGACCCGCGGCATGCCCGGCCGCCGCCGGCATCCGCCCGGTTCAGCGCTGGGCGGGCAGGGGCCGGGCGCCCAC CCCTGGGGCGGCTTCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTNSSLPSLLRALALAVSWALLTVAGPVAAAAAQGDAEQARAAFEAAQAARTAERARIQEERAALDARKKKEEAVCYQRF SVESCLGTVRSQVRDAEAVLRKREVELNNAERREKAALRMQSIEQKQAEQRQKIESGERPAPMRAESRSRAQPEDRAQRE EEARSRAAQQRAREESHRNAEAERAATQPARSAEARARYEAKQRAARERREKRERANAEAAASGRKPAAPLPDPADPAPP SAPAGSAPAR
Sequences:
>Translated_250_residues MTNSSLPSLLRALALAVSWALLTVAGPVAAAAAQGDAEQARAAFEAAQAARTAERARIQEERAALDARKKKEEAVCYQRF SVESCLGTVRSQVRDAEAVLRKREVELNNAERREKAALRMQSIEQKQAEQRQKIESGERPAPMRAESRSRAQPEDRAQRE EEARSRAAQQRAREESHRNAEAERAATQPARSAEARARYEAKQRAARERREKRERANAEAAASGRKPAAPLPDPADPAPP SAPAGSAPAR >Mature_249_residues TNSSLPSLLRALALAVSWALLTVAGPVAAAAAQGDAEQARAAFEAAQAARTAERARIQEERAALDARKKKEEAVCYQRFS VESCLGTVRSQVRDAEAVLRKREVELNNAERREKAALRMQSIEQKQAEQRQKIESGERPAPMRAESRSRAQPEDRAQREE EARSRAAQQRAREESHRNAEAERAATQPARSAEARARYEAKQRAARERREKRERANAEAAASGRKPAAPLPDPADPAPPS APAGSAPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27401; Mature: 27269
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSSLPSLLRALALAVSWALLTVAGPVAAAAAQGDAEQARAAFEAAQAARTAERARIQE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ERAALDARKKKEEAVCYQRFSVESCLGTVRSQVRDAEAVLRKREVELNNAERREKAALRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH QSIEQKQAEQRQKIESGERPAPMRAESRSRAQPEDRAQREEEARSRAAQQRAREESHRNA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAERAATQPARSAEARARYEAKQRAARERREKRERANAEAAASGRKPAAPLPDPADPAPP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SAPAGSAPAR CCCCCCCCCC >Mature Secondary Structure TNSSLPSLLRALALAVSWALLTVAGPVAAAAAQGDAEQARAAFEAAQAARTAERARIQE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ERAALDARKKKEEAVCYQRFSVESCLGTVRSQVRDAEAVLRKREVELNNAERREKAALRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH QSIEQKQAEQRQKIESGERPAPMRAESRSRAQPEDRAQREEEARSRAAQQRAREESHRNA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EAERAATQPARSAEARARYEAKQRAARERREKRERANAEAAASGRKPAAPLPDPADPAPP HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SAPAGSAPAR CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA