| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611881
Identifier: 120611881
GI number: 120611881
Start: 3554989
End: 3555372
Strand: Direct
Name: 120611881
Synonym: Aave_3223
Alternate gene names: NA
Gene position: 3554989-3555372 (Clockwise)
Preceding gene: 120611879
Following gene: 120611882
Centisome position: 66.41
GC content: 63.02
Gene sequence:
>384_bases ATGTCCGACTGCAATTGCAATTCCCAGAACAACGGCGCACAGGGTGGAAACCACGTTCCCAACTACGCGCTGACCGGCTT CGCCGCCGCTCCGCAGAACGCAGCGCCTGCCGCGCCCAGCGTGAACCTGGAAGGCGTGCATGCGCTGAAACTCTCCGTCT GCGTGGGCGGCAGCTACAACCAGTCCACCAACCAGATCTGCTTCTCCATCCCGATCTACGGCAACCTGTGCTTCACGTCG CCGATCCACATTCCGGTCAGCGCGCAGATCAAGGTGTGCGCGGAAACCTGCGGCAGCTTCATCCCCACGGGGCTGAAGGC CACCGTGTACCTGAACGGCAGCAGCCAGCCGTCCTTCACCGTGACCGTGTTCGGCGTCTGCTGA
Upstream 100 bases:
>100_bases ATCCGGCCCGGACCGATCCGAAGGCGAGCCCACGGCCGGAACCACGGAAGTTGCACGCCTCCGGCCTTTACTCAGCAACT GATACCGGAGAGGAAAGACC
Downstream 100 bases:
>100_bases ACCCGGGCACCGAACCACACCCGAGAGGAAGTACCACCATGGCATCCTGCCCACCCTTCAGCGTCGATTTCACCGGCAGC GCCCAGGATCTGTTCGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSDCNCNSQNNGAQGGNHVPNYALTGFAAAPQNAAPAAPSVNLEGVHALKLSVCVGGSYNQSTNQICFSIPIYGNLCFTS PIHIPVSAQIKVCAETCGSFIPTGLKATVYLNGSSQPSFTVTVFGVC
Sequences:
>Translated_127_residues MSDCNCNSQNNGAQGGNHVPNYALTGFAAAPQNAAPAAPSVNLEGVHALKLSVCVGGSYNQSTNQICFSIPIYGNLCFTS PIHIPVSAQIKVCAETCGSFIPTGLKATVYLNGSSQPSFTVTVFGVC >Mature_126_residues SDCNCNSQNNGAQGGNHVPNYALTGFAAAPQNAAPAAPSVNLEGVHALKLSVCVGGSYNQSTNQICFSIPIYGNLCFTSP IHIPVSAQIKVCAETCGSFIPTGLKATVYLNGSSQPSFTVTVFGVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13044; Mature: 12913
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDCNCNSQNNGAQGGNHVPNYALTGFAAAPQNAAPAAPSVNLEGVHALKLSVCVGGSYN CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC QSTNQICFSIPIYGNLCFTSPIHIPVSAQIKVCAETCGSFIPTGLKATVYLNGSSQPSFT CCCCEEEEEECCCCCEEECCCEECCCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCCCEE VTVFGVC EEEEEEC >Mature Secondary Structure SDCNCNSQNNGAQGGNHVPNYALTGFAAAPQNAAPAAPSVNLEGVHALKLSVCVGGSYN CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC QSTNQICFSIPIYGNLCFTSPIHIPVSAQIKVCAETCGSFIPTGLKATVYLNGSSQPSFT CCCCEEEEEECCCCCEEECCCEECCCCCCEEEEHHHHCCCCCCCCEEEEEECCCCCCCEE VTVFGVC EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA