| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611871
Identifier: 120611871
GI number: 120611871
Start: 3543101
End: 3544084
Strand: Direct
Name: 120611871
Synonym: Aave_3213
Alternate gene names: NA
Gene position: 3543101-3544084 (Clockwise)
Preceding gene: 120611870
Following gene: 120611872
Centisome position: 66.19
GC content: 69.51
Gene sequence:
>984_bases ATGGCACGCAAACGCTCTCTCTGGCGGCTGGCCGCCGCCGCGGCCGCCACGGCCGCCTGGATCGGCTTTGCCGGTCCCGC CCTCGCCGCCTACCCCGAGCAGCCCGTCCGGCTGGTCGTCGGCTTCCCGCCGGGGGGCGGCGGCGACCTGTACGGACGCA CCATCGCCCAGGCCCTGTCCAAAACCATCGGCCAGACCGTGATCGTGGACAACAAGGCGGGCGCGGGCGGCAACATCGCG GCCGAGAGCGTGGCCCGCGCCAGACCCGACGGCTACACGCTGATCCTGGCGATGAGCGGCAACTTCGGCAGCGCCGTGGC GCTGCGCCCCAACCTGCCCTACAAGGTGCCGGACGATTTCGTGCCGATCGCGCAACTGGTGGAAACCCCCTTCGGCCTGA TGGTGGACGGCAACTCTCCCATCCAGACCGCCCGGCAGTTCATGGCCGAGGCCAAGGCCCGGCCCGGGAAGATGACGTAC GCGTCCACCGGCACCGGCGGCGCCGCGCAGATCGTGATGGAAATGGTCAAGCAGAAGGCCGACGTGGACATTCTGCACAT CCCCTACCGGGGATCGGGTCCGGCGCTCAACGACCTGTTCGGCGGACAGGTGTCGAGCTTCTTCGCCCCCTACACCCCGC TGATGGGCCAGATCGCGGGTGGCAAGATCCGGCTGCTGGCGGTCAGCACCCGCAAGCGCATTCCGTCCCTGCCGGACGTA CCGACGCTGCAGGAATCGGGCATCGACGTGGTGATGACGCAGTGGTACGGCCTGGCCGCGCCCGCCGGCACGCCCCGGGA GGTGACCGACCACATCGGCCGCGCGGTGAAGGAAGCCATGAAGGACCCGGAGCTGCTCAAGGTCTATCGCGCGGACGGCG CGCAGGAGTCGCACCTGATGGGCAAGGCCTTCGGCGACTTCATCGTGCAGGACATCGCCAACTACCGGCGGGCCGTCGAG AAGGGCCACCTCAAGGCCGAGTGA
Upstream 100 bases:
>100_bases GGCTCCCGGGCGCGGCGCTCTACCCCGGCTCCTGGAGCGAGTGGAGCGCCCAGCCGGGCGCGCCCATCGCCACGGGCGCG GCTTGACCACGGGAAACACC
Downstream 100 bases:
>100_bases GAACACCATGCGCACCGACACACCCCGCTTCCGACCGCACAGCTCCCACTGGGGCGTGTTCTCCGCCGCCTGGGACGGCC AGACCCTCTCCGTCCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MARKRSLWRLAAAAAATAAWIGFAGPALAAYPEQPVRLVVGFPPGGGGDLYGRTIAQALSKTIGQTVIVDNKAGAGGNIA AESVARARPDGYTLILAMSGNFGSAVALRPNLPYKVPDDFVPIAQLVETPFGLMVDGNSPIQTARQFMAEAKARPGKMTY ASTGTGGAAQIVMEMVKQKADVDILHIPYRGSGPALNDLFGGQVSSFFAPYTPLMGQIAGGKIRLLAVSTRKRIPSLPDV PTLQESGIDVVMTQWYGLAAPAGTPREVTDHIGRAVKEAMKDPELLKVYRADGAQESHLMGKAFGDFIVQDIANYRRAVE KGHLKAE
Sequences:
>Translated_327_residues MARKRSLWRLAAAAAATAAWIGFAGPALAAYPEQPVRLVVGFPPGGGGDLYGRTIAQALSKTIGQTVIVDNKAGAGGNIA AESVARARPDGYTLILAMSGNFGSAVALRPNLPYKVPDDFVPIAQLVETPFGLMVDGNSPIQTARQFMAEAKARPGKMTY ASTGTGGAAQIVMEMVKQKADVDILHIPYRGSGPALNDLFGGQVSSFFAPYTPLMGQIAGGKIRLLAVSTRKRIPSLPDV PTLQESGIDVVMTQWYGLAAPAGTPREVTDHIGRAVKEAMKDPELLKVYRADGAQESHLMGKAFGDFIVQDIANYRRAVE KGHLKAE >Mature_326_residues ARKRSLWRLAAAAAATAAWIGFAGPALAAYPEQPVRLVVGFPPGGGGDLYGRTIAQALSKTIGQTVIVDNKAGAGGNIAA ESVARARPDGYTLILAMSGNFGSAVALRPNLPYKVPDDFVPIAQLVETPFGLMVDGNSPIQTARQFMAEAKARPGKMTYA STGTGGAAQIVMEMVKQKADVDILHIPYRGSGPALNDLFGGQVSSFFAPYTPLMGQIAGGKIRLLAVSTRKRIPSLPDVP TLQESGIDVVMTQWYGLAAPAGTPREVTDHIGRAVKEAMKDPELLKVYRADGAQESHLMGKAFGDFIVQDIANYRRAVEK GHLKAE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34602; Mature: 34471
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKRSLWRLAAAAAATAAWIGFAGPALAAYPEQPVRLVVGFPPGGGGDLYGRTIAQALS CCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH KTIGQTVIVDNKAGAGGNIAAESVARARPDGYTLILAMSGNFGSAVALRPNLPYKVPDDF HHHCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCH VPIAQLVETPFGLMVDGNSPIQTARQFMAEAKARPGKMTYASTGTGGAAQIVMEMVKQKA HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHC DVDILHIPYRGSGPALNDLFGGQVSSFFAPYTPLMGQIAGGKIRLLAVSTRKRIPSLPDV CCEEEEECCCCCCCCHHHHHCCHHHHHHCCHHHHHHHCCCCEEEEEEEEHHHCCCCCCCC PTLQESGIDVVMTQWYGLAAPAGTPREVTDHIGRAVKEAMKDPELLKVYRADGAQESHLM CCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH GKAFGDFIVQDIANYRRAVEKGHLKAE HHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARKRSLWRLAAAAAATAAWIGFAGPALAAYPEQPVRLVVGFPPGGGGDLYGRTIAQALS CCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH KTIGQTVIVDNKAGAGGNIAAESVARARPDGYTLILAMSGNFGSAVALRPNLPYKVPDDF HHHCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCH VPIAQLVETPFGLMVDGNSPIQTARQFMAEAKARPGKMTYASTGTGGAAQIVMEMVKQKA HHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHC DVDILHIPYRGSGPALNDLFGGQVSSFFAPYTPLMGQIAGGKIRLLAVSTRKRIPSLPDV CCEEEEECCCCCCCCHHHHHCCHHHHHHCCHHHHHHHCCCCEEEEEEEEHHHCCCCCCCC PTLQESGIDVVMTQWYGLAAPAGTPREVTDHIGRAVKEAMKDPELLKVYRADGAQESHLM CCHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH GKAFGDFIVQDIANYRRAVEKGHLKAE HHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]