| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is sseA [H]
Identifier: 120611870
GI number: 120611870
Start: 3542187
End: 3543086
Strand: Direct
Name: sseA [H]
Synonym: Aave_3212
Alternate gene names: 120611870
Gene position: 3542187-3543086 (Clockwise)
Preceding gene: 120611869
Following gene: 120611871
Centisome position: 66.17
GC content: 74.0
Gene sequence:
>900_bases GTGAACGCCGCCGGCGCACGGCAACAACCCGAGGACATTCCCATGGCATACGACACCCTGATTTCCGCCGCGGAGCTGGC GGCCGCCCGCGAAGCGGGCACCCCGCTGCTGGTGCTGGACTGCAGCTTCGAACTCTCCAGCCACGATGCCGGCCGGCAGG CCTACGACGCGGGCCACATCCCGGGCGCGCGCTACGTGCACCTGGAACATGTGCTGTCGGCGGAGAAGACCGGCACCAAC GGCCGCCACCCGCTCCCGGGCCGCGAGGCCTTCGCGCAGGCGATGGCCTCGCTGGGCGCGCAGGACGACACCCAGGTGGT GGCGTACGACAACGCCGGCGGCATGTACGCGGCACGCCTGTGGTGGATGCTGCGCTGGGCCGGGCACCGGGCCGCGGCCG TGCTCGATGGCGGCATGGCCGCCTGGAAGGCCGCGGGCCAGCCGGTGTCCACCGAGGAGCCGGCCCCGCCCTCCGCGGGC CGCTTCACCCTGCGCACGCCGCTGGTATCGACGCTGGACTACGAGGACGTGAAGGCCAACATCGGCACCGGCCGGCGCCT GGTGCTCGACGCCCGCGCGCCCGACCGGTTCCGCGGGGAGAACGAGACCATGGACCCGATCGGCGGCCACATACCGGGCG CGAAGAACCGGCTGTTCAAGGACAACCTGGGTGCCGATGGCCGCTTCAAGCCCGCCGCCCAGCTGCGCGGCGAGTTCGAC GCCGTCACCGGCGGCCGCCCGGCGGCGGAGATCGTCCACCAGTGCGGCTCGGGCGTCACGGCCTGCCACAACCTGCTGGC CATGGAGGTCGCCGGGCTCCCGGGCGCGGCGCTCTACCCCGGCTCCTGGAGCGAGTGGAGCGCCCAGCCGGGCGCGCCCA TCGCCACGGGCGCGGCTTGA
Upstream 100 bases:
>100_bases AGCGCGACCTGCCGCTGGACGCCTTCCGGCAGTTCATCGTCGAGGACATCGCCCGCTACAAGGCCGCCGTCACGCCCGCG CTCCTCCAGGAAATCTCCCA
Downstream 100 bases:
>100_bases CCACGGGAAACACCATGGCACGCAAACGCTCTCTCTGGCGGCTGGCCGCCGCCGCGGCCGCCACGGCCGCCTGGATCGGC TTTGCCGGTCCCGCCCTCGC
Product: 3-mercaptopyruvate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNAAGARQQPEDIPMAYDTLISAAELAAAREAGTPLLVLDCSFELSSHDAGRQAYDAGHIPGARYVHLEHVLSAEKTGTN GRHPLPGREAFAQAMASLGAQDDTQVVAYDNAGGMYAARLWWMLRWAGHRAAAVLDGGMAAWKAAGQPVSTEEPAPPSAG RFTLRTPLVSTLDYEDVKANIGTGRRLVLDARAPDRFRGENETMDPIGGHIPGAKNRLFKDNLGADGRFKPAAQLRGEFD AVTGGRPAAEIVHQCGSGVTACHNLLAMEVAGLPGAALYPGSWSEWSAQPGAPIATGAA
Sequences:
>Translated_299_residues MNAAGARQQPEDIPMAYDTLISAAELAAAREAGTPLLVLDCSFELSSHDAGRQAYDAGHIPGARYVHLEHVLSAEKTGTN GRHPLPGREAFAQAMASLGAQDDTQVVAYDNAGGMYAARLWWMLRWAGHRAAAVLDGGMAAWKAAGQPVSTEEPAPPSAG RFTLRTPLVSTLDYEDVKANIGTGRRLVLDARAPDRFRGENETMDPIGGHIPGAKNRLFKDNLGADGRFKPAAQLRGEFD AVTGGRPAAEIVHQCGSGVTACHNLLAMEVAGLPGAALYPGSWSEWSAQPGAPIATGAA >Mature_299_residues MNAAGARQQPEDIPMAYDTLISAAELAAAREAGTPLLVLDCSFELSSHDAGRQAYDAGHIPGARYVHLEHVLSAEKTGTN GRHPLPGREAFAQAMASLGAQDDTQVVAYDNAGGMYAARLWWMLRWAGHRAAAVLDGGMAAWKAAGQPVSTEEPAPPSAG RFTLRTPLVSTLDYEDVKANIGTGRRLVLDARAPDRFRGENETMDPIGGHIPGAKNRLFKDNLGADGRFKPAAQLRGEFD AVTGGRPAAEIVHQCGSGVTACHNLLAMEVAGLPGAALYPGSWSEWSAQPGAPIATGAA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=298, Percent_Identity=35.9060402684564, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI194473668, Length=298, Percent_Identity=39.261744966443, Blast_Score=154, Evalue=8e-38, Organism=Homo sapiens, GI61835204, Length=298, Percent_Identity=39.261744966443, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI194473681, Length=298, Percent_Identity=39.261744966443, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI87082121, Length=247, Percent_Identity=34.412955465587, Blast_Score=111, Evalue=7e-26, Organism=Escherichia coli, GI87081967, Length=263, Percent_Identity=26.9961977186312, Blast_Score=71, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71997283, Length=259, Percent_Identity=29.3436293436293, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17561888, Length=249, Percent_Identity=29.718875502008, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI115534702, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324825, Length=227, Percent_Identity=27.7533039647577, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 31400; Mature: 31400
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00380 RHODANESE_1 ; PS00683 RHODANESE_2 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAGARQQPEDIPMAYDTLISAAELAAAREAGTPLLVLDCSFELSSHDAGRQAYDAGHI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCCCC PGARYVHLEHVLSAEKTGTNGRHPLPGREAFAQAMASLGAQDDTQVVAYDNAGGMYAARL CCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH WWMLRWAGHRAAAVLDGGMAAWKAAGQPVSTEEPAPPSAGRFTLRTPLVSTLDYEDVKAN HHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHCCHHHHHHC IGTGRRLVLDARAPDRFRGENETMDPIGGHIPGAKNRLFKDNLGADGRFKPAAQLRGEFD CCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC AVTGGRPAAEIVHQCGSGVTACHNLLAMEVAGLPGAALYPGSWSEWSAQPGAPIATGAA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNAAGARQQPEDIPMAYDTLISAAELAAAREAGTPLLVLDCSFELSSHDAGRQAYDAGHI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCCCC PGARYVHLEHVLSAEKTGTNGRHPLPGREAFAQAMASLGAQDDTQVVAYDNAGGMYAARL CCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHH WWMLRWAGHRAAAVLDGGMAAWKAAGQPVSTEEPAPPSAGRFTLRTPLVSTLDYEDVKAN HHHHHHCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHCCHHHHHHC IGTGRRLVLDARAPDRFRGENETMDPIGGHIPGAKNRLFKDNLGADGRFKPAAQLRGEFD CCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC AVTGGRPAAEIVHQCGSGVTACHNLLAMEVAGLPGAALYPGSWSEWSAQPGAPIATGAA CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]