Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120611869

Identifier: 120611869

GI number: 120611869

Start: 3541204

End: 3542190

Strand: Direct

Name: 120611869

Synonym: Aave_3211

Alternate gene names: NA

Gene position: 3541204-3542190 (Clockwise)

Preceding gene: 120611868

Following gene: 120611870

Centisome position: 66.16

GC content: 71.23

Gene sequence:

>987_bases
ATGTTCGATACCCTTCCCCGCCGCCGGCTCGGCGCGCTGGCCCTGGCCTGCGCAGCCACCTGGGCCTGCGCGGCCCCGGC
GCATGCCGCGTTCCCCGAGCAGCCCATCAAACTGGTCGTCGGCTTTCCGCCGGGCGGCGGCGGCGACCTCTACGGCCGCC
TCATCGCCAACGCCATGGGCAAGACCATCGGCCAGACGGTGATCGTGGAGAACCGCGCGGGCGCGGGCGGCAACATCGCG
GCCGACACCGTCGCCAAGGCCAGGCCCGACGGCTACACCCTCCTGCTGGCGATGAGCGGCAACCTGGCGGTATCGCCGGC
CGTCAAGCCGCAGAGCATTCCGTACAAGGCCCCGGACGATTTCGCGCCGGTCGGCCTGATCCTCGAGGCGCCGCACGGCC
TCTTCGTGGGCCACAACTCGCGCTTCACATCGGCGCGCGCCCTGCTGGACGCGGCCAGGAAGGAAAAGCTCAACTTCGCG
TCCACCGGCACCGGTGCCGCCGCCCACATCGGCATGGAGATGGTCAAGCAATCCGCGGGCGTGGAGATGCTGCACGTGCC
CTACAAGGGCTCGGGCCCGGCGATCACCGACCTGCTGGGCGGGCAGATCGACAGCTTCTTCGCCACGGCCTCGCCCCTGG
TCGGCCAGGTCCGCCAGGGACAGCTGCGCCTGCTGGCGATCACCGGCGGCCAGCGCAACGCCGCCATCCCCGACGTGCCG
ACCTTCAAGGAACTGGGCGTGAACGTTCCCGTCACCCAGTGGTACGGCCTGGTCGCGCCGGCGGGCACGCCCCGGCCCGT
GCTGAAGGTGCTCTCCGAGCACCTGAGCCGGGCGCTCGCGACACCCGAAGTGCGCGACGCCATCCGCAAGGACGCGGCCA
CCGAGCGCGACCTGCCGCTGGACGCCTTCCGGCAGTTCATCGTCGAGGACATCGCCCGCTACAAGGCCGCCGTCACGCCC
GCGCTCCTCCAGGAAATCTCCCAGTGA

Upstream 100 bases:

>100_bases
GACCGCGTCGTCGCCGCGCAGAAGTCCTGGCTGGACTGACCTGCGCCCCCCGGCGGAGGCGGGACCACCCGCCCCGCATT
CCTGCAAGGAGACAAGACCC

Downstream 100 bases:

>100_bases
ACGCCGCCGGCGCACGGCAACAACCCGAGGACATTCCCATGGCATACGACACCCTGATTTCCGCCGCGGAGCTGGCGGCC
GCCCGCGAAGCGGGCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MFDTLPRRRLGALALACAATWACAAPAHAAFPEQPIKLVVGFPPGGGGDLYGRLIANAMGKTIGQTVIVENRAGAGGNIA
ADTVAKARPDGYTLLLAMSGNLAVSPAVKPQSIPYKAPDDFAPVGLILEAPHGLFVGHNSRFTSARALLDAARKEKLNFA
STGTGAAAHIGMEMVKQSAGVEMLHVPYKGSGPAITDLLGGQIDSFFATASPLVGQVRQGQLRLLAITGGQRNAAIPDVP
TFKELGVNVPVTQWYGLVAPAGTPRPVLKVLSEHLSRALATPEVRDAIRKDAATERDLPLDAFRQFIVEDIARYKAAVTP
ALLQEISQ

Sequences:

>Translated_328_residues
MFDTLPRRRLGALALACAATWACAAPAHAAFPEQPIKLVVGFPPGGGGDLYGRLIANAMGKTIGQTVIVENRAGAGGNIA
ADTVAKARPDGYTLLLAMSGNLAVSPAVKPQSIPYKAPDDFAPVGLILEAPHGLFVGHNSRFTSARALLDAARKEKLNFA
STGTGAAAHIGMEMVKQSAGVEMLHVPYKGSGPAITDLLGGQIDSFFATASPLVGQVRQGQLRLLAITGGQRNAAIPDVP
TFKELGVNVPVTQWYGLVAPAGTPRPVLKVLSEHLSRALATPEVRDAIRKDAATERDLPLDAFRQFIVEDIARYKAAVTP
ALLQEISQ
>Mature_328_residues
MFDTLPRRRLGALALACAATWACAAPAHAAFPEQPIKLVVGFPPGGGGDLYGRLIANAMGKTIGQTVIVENRAGAGGNIA
ADTVAKARPDGYTLLLAMSGNLAVSPAVKPQSIPYKAPDDFAPVGLILEAPHGLFVGHNSRFTSARALLDAARKEKLNFA
STGTGAAAHIGMEMVKQSAGVEMLHVPYKGSGPAITDLLGGQIDSFFATASPLVGQVRQGQLRLLAITGGQRNAAIPDVP
TFKELGVNVPVTQWYGLVAPAGTPRPVLKVLSEHLSRALATPEVRDAIRKDAATERDLPLDAFRQFIVEDIARYKAAVTP
ALLQEISQ

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34379; Mature: 34379

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDTLPRRRLGALALACAATWACAAPAHAAFPEQPIKLVVGFPPGGGGDLYGRLIANAMG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
KTIGQTVIVENRAGAGGNIAADTVAKARPDGYTLLLAMSGNLAVSPAVKPQSIPYKAPDD
HHHCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCC
FAPVGLILEAPHGLFVGHNSRFTSARALLDAARKEKLNFASTGTGAAAHIGMEMVKQSAG
CCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
VEMLHVPYKGSGPAITDLLGGQIDSFFATASPLVGQVRQGQLRLLAITGGQRNAAIPDVP
CEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
TFKELGVNVPVTQWYGLVAPAGTPRPVLKVLSEHLSRALATPEVRDAIRKDAATERDLPL
CHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH
DAFRQFIVEDIARYKAAVTPALLQEISQ
HHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MFDTLPRRRLGALALACAATWACAAPAHAAFPEQPIKLVVGFPPGGGGDLYGRLIANAMG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
KTIGQTVIVENRAGAGGNIAADTVAKARPDGYTLLLAMSGNLAVSPAVKPQSIPYKAPDD
HHHCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCC
FAPVGLILEAPHGLFVGHNSRFTSARALLDAARKEKLNFASTGTGAAAHIGMEMVKQSAG
CCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
VEMLHVPYKGSGPAITDLLGGQIDSFFATASPLVGQVRQGQLRLLAITGGQRNAAIPDVP
CEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
TFKELGVNVPVTQWYGLVAPAGTPRPVLKVLSEHLSRALATPEVRDAIRKDAATERDLPL
CHHHCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCH
DAFRQFIVEDIARYKAAVTPALLQEISQ
HHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]