| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611387
Identifier: 120611387
GI number: 120611387
Start: 2989474
End: 2991030
Strand: Reverse
Name: 120611387
Synonym: Aave_2723
Alternate gene names: NA
Gene position: 2991030-2989474 (Counterclockwise)
Preceding gene: 120611388
Following gene: 120611386
Centisome position: 55.88
GC content: 66.73
Gene sequence:
>1557_bases ATGAAGTGGTTCGGACGATCTGGCGTGCGCAACGGCGCAGACGCGGACGGCCAGCTGGACGACGCAGCGTCGAGCGCCGG AGCGGCCAGCGAGGTTCTCGAAATCGGTGGCATGCGGTTGGCAATCGCGCTGGCATGGACGGTAGCCGAGAGCACTTCCG AGGGACGACGATTCGCCGGGAAGAACAACGCCTACCTGGTCAAAGACGTCGGTGGCGAGACCGTAGCGGCCGCGGGCGGC CGACAGGTGATTGGCATGCTCGCGGGCGGAGCGGTCGTCGGCCACGTCGTGCCCAACGCCTTCGTCTACCACCCGCTGCC CAACCACCGATTCTGGATCTGCCTCATCCGCGATGGGGTGCCCTACCCTGCCTACGACCAGGTCGTTCCCGCCGCCGACG CGGCGCAGCTCTACACCAACGCCACCTCCATGGCAGCTGCCGACACGCGGATGATCGGCGACACGGCGCCCGCGGCGTTC ACGCTCGAGGAAGTGCTTGCCAAGGTGCGATCGCTACCTCGCAAGGAACTCGAGACGCTCCGGCTGAAGAAGAACGGAGT CCAGCTGCGAACCGTCGTCGCCCTGGCCGCGCTGGTCGCGGCTCTCGCTGCTGCGGCGCAGGTTGCCATCCAATACCAAG ACCAGCTGCGCAGCGAGCGCAAGCGGCAAGACATGATGCGGGCGCTCCTGCAGAGCCAACAGGAGCGGGCGGCGGAGGCC ACACGCATCGCAGCGGCCAAACAGGCCTACGAGCAGAACGTCGCGCGGCAGCGGGCGCTGTTCCGGTCGCACAGCGCGGT GCTTCCTCAATGGCAGCAATGTGAGGCGCTGCGCCAGCGACTTCCTCTTTCGGACTGGGGGTATCGCCCGTCCAAGCTGA CGTGCGACTTCGGCGCCGGCAAGGCCACCGTCGAGTGGCAGCCGGTAAACCTTCAGACGCGGGTCGCTGACCGGGCGCAC CTGCCGGGCATTCTGGACCCACTCGACATCGGTACCCGCATCGTGTCCACCTTCGACATGCCGCAGTTGGACCCCAGCGA ACCAGAGGATCGGCGCGTCGAGCTCAAGTTGGCGCGCATGGCCATCGCCGACTGGGGCCAGGCTCATCTCAGCGGCGGCT TGCGACAGGGTACCGAGGAGGTCGTCACCGTGACCCCACCGGCTGACATCGCGGGACTGGACGGCGTTCACAGCGTCACG CTGGGGTCCAAGCAAACCGTCGACGTCTCGGCGACCACGAGCCGGCACGTGCTCATGCTCGGCGAGGCCATGCGCTTCCT CAACACGTTTCCCATCACGTTCACGCAGATGGTGTGGTCGTCGCCCAGTTCGCCGGCACATCCACCCTCTTCATTCGGCA GTAAGGACAGGTCTCATGGAATTGGGCATCTCTTTCAGATTACCGTCGCGCGGCGCTACGCCGGTGGCTCCTACCCGCGC CGGCGCAGCCGACACCGCGCGACCCGATGCCGAACGCGCAAGCCGCTTGTCCGAGAGCCAGGAGCGCCAGCGCCAACTCG AACAGATCGCGTTCAAGGAAGCCACGCAGCTGCCTGA
Upstream 100 bases:
>100_bases CCCGCGGAGCAGCCGATGTCGACACCGCGGGCCGATGCATCGCAGGCGGCCGCTGGTTCGCCTTCGACATCCCCCTGAGC GCCGGCATGAGGTCATGTAT
Downstream 100 bases:
>100_bases AGGCGACTACATCAACCTGTTCGCGCTCAAGCGGCCCGTCTCGGAGATCCACAGAGCGACCTTTGCCGCAATCCGTAGCG AGTTGTTGGTCGACCAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MKWFGRSGVRNGADADGQLDDAASSAGAASEVLEIGGMRLAIALAWTVAESTSEGRRFAGKNNAYLVKDVGGETVAAAGG RQVIGMLAGGAVVGHVVPNAFVYHPLPNHRFWICLIRDGVPYPAYDQVVPAADAAQLYTNATSMAAADTRMIGDTAPAAF TLEEVLAKVRSLPRKELETLRLKKNGVQLRTVVALAALVAALAAAAQVAIQYQDQLRSERKRQDMMRALLQSQQERAAEA TRIAAAKQAYEQNVARQRALFRSHSAVLPQWQQCEALRQRLPLSDWGYRPSKLTCDFGAGKATVEWQPVNLQTRVADRAH LPGILDPLDIGTRIVSTFDMPQLDPSEPEDRRVELKLARMAIADWGQAHLSGGLRQGTEEVVTVTPPADIAGLDGVHSVT LGSKQTVDVSATTSRHVLMLGEAMRFLNTFPITFTQMVWSSPSSPAHPPSSFGSKDRSHGIGHLFQITVARRYAGGSYPR RRSRHRATRCRTRKPLVREPGAPAPTRTDRVQGSHAAA
Sequences:
>Translated_518_residues MKWFGRSGVRNGADADGQLDDAASSAGAASEVLEIGGMRLAIALAWTVAESTSEGRRFAGKNNAYLVKDVGGETVAAAGG RQVIGMLAGGAVVGHVVPNAFVYHPLPNHRFWICLIRDGVPYPAYDQVVPAADAAQLYTNATSMAAADTRMIGDTAPAAF TLEEVLAKVRSLPRKELETLRLKKNGVQLRTVVALAALVAALAAAAQVAIQYQDQLRSERKRQDMMRALLQSQQERAAEA TRIAAAKQAYEQNVARQRALFRSHSAVLPQWQQCEALRQRLPLSDWGYRPSKLTCDFGAGKATVEWQPVNLQTRVADRAH LPGILDPLDIGTRIVSTFDMPQLDPSEPEDRRVELKLARMAIADWGQAHLSGGLRQGTEEVVTVTPPADIAGLDGVHSVT LGSKQTVDVSATTSRHVLMLGEAMRFLNTFPITFTQMVWSSPSSPAHPPSSFGSKDRSHGIGHLFQITVARRYAGGSYPR RRSRHRATRCRTRKPLVREPGAPAPTRTDRVQGSHAAA >Mature_518_residues MKWFGRSGVRNGADADGQLDDAASSAGAASEVLEIGGMRLAIALAWTVAESTSEGRRFAGKNNAYLVKDVGGETVAAAGG RQVIGMLAGGAVVGHVVPNAFVYHPLPNHRFWICLIRDGVPYPAYDQVVPAADAAQLYTNATSMAAADTRMIGDTAPAAF TLEEVLAKVRSLPRKELETLRLKKNGVQLRTVVALAALVAALAAAAQVAIQYQDQLRSERKRQDMMRALLQSQQERAAEA TRIAAAKQAYEQNVARQRALFRSHSAVLPQWQQCEALRQRLPLSDWGYRPSKLTCDFGAGKATVEWQPVNLQTRVADRAH LPGILDPLDIGTRIVSTFDMPQLDPSEPEDRRVELKLARMAIADWGQAHLSGGLRQGTEEVVTVTPPADIAGLDGVHSVT LGSKQTVDVSATTSRHVLMLGEAMRFLNTFPITFTQMVWSSPSSPAHPPSSFGSKDRSHGIGHLFQITVARRYAGGSYPR RRSRHRATRCRTRKPLVREPGAPAPTRTDRVQGSHAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56137; Mature: 56137
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWFGRSGVRNGADADGQLDDAASSAGAASEVLEIGGMRLAIALAWTVAESTSEGRRFAG CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCC KNNAYLVKDVGGETVAAAGGRQVIGMLAGGAVVGHVVPNAFVYHPLPNHRFWICLIRDGV CCCCEEEEECCCCEEECCCCHHHHHHHHCCHHHHHHCCCCEEECCCCCCCEEEEEEECCC PYPAYDQVVPAADAAQLYTNATSMAAADTRMIGDTAPAAFTLEEVLAKVRSLPRKELETL CCCCHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH RLKKNGVQLRTVVALAALVAALAAAAQVAIQYQDQLRSERKRQDMMRALLQSQQERAAEA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIAAAKQAYEQNVARQRALFRSHSAVLPQWQQCEALRQRLPLSDWGYRPSKLTCDFGAG HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCC KATVEWQPVNLQTRVADRAHLPGILDPLDIGTRIVSTFDMPQLDPSEPEDRRVELKLARM CEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AIADWGQAHLSGGLRQGTEEVVTVTPPADIAGLDGVHSVTLGSKQTVDVSATTSRHVLML HHHHCCHHHHCCCHHCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHH GEAMRFLNTFPITFTQMVWSSPSSPAHPPSSFGSKDRSHGIGHLFQITVARRYAGGSYPR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCH RRSRHRATRCRTRKPLVREPGAPAPTRTDRVQGSHAAA HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKWFGRSGVRNGADADGQLDDAASSAGAASEVLEIGGMRLAIALAWTVAESTSEGRRFAG CCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHCCCCCCCCCC KNNAYLVKDVGGETVAAAGGRQVIGMLAGGAVVGHVVPNAFVYHPLPNHRFWICLIRDGV CCCCEEEEECCCCEEECCCCHHHHHHHHCCHHHHHHCCCCEEECCCCCCCEEEEEEECCC PYPAYDQVVPAADAAQLYTNATSMAAADTRMIGDTAPAAFTLEEVLAKVRSLPRKELETL CCCCHHCCCCCCHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH RLKKNGVQLRTVVALAALVAALAAAAQVAIQYQDQLRSERKRQDMMRALLQSQQERAAEA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRIAAAKQAYEQNVARQRALFRSHSAVLPQWQQCEALRQRLPLSDWGYRPSKLTCDFGAG HHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCC KATVEWQPVNLQTRVADRAHLPGILDPLDIGTRIVSTFDMPQLDPSEPEDRRVELKLARM CEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AIADWGQAHLSGGLRQGTEEVVTVTPPADIAGLDGVHSVTLGSKQTVDVSATTSRHVLML HHHHCCHHHHCCCHHCCCCCEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCCHHHHH GEAMRFLNTFPITFTQMVWSSPSSPAHPPSSFGSKDRSHGIGHLFQITVARRYAGGSYPR HHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCH RRSRHRATRCRTRKPLVREPGAPAPTRTDRVQGSHAAA HHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA