| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611388
Identifier: 120611388
GI number: 120611388
Start: 2991053
End: 2991682
Strand: Reverse
Name: 120611388
Synonym: Aave_2724
Alternate gene names: NA
Gene position: 2991682-2991053 (Counterclockwise)
Preceding gene: 120611389
Following gene: 120611387
Centisome position: 55.89
GC content: 70.63
Gene sequence:
>630_bases ATGGCTGACGGAAAGTCCATCGGCTGGGGAATGCTGGCGGCCGTCGCCTTGGCAGCAGGCGCCCACGCGCAGCCCAGGAC GCTCGCCGATCGCGCGGCCGAGGCCGACGTCACACTGGAACTGCTTCAGAAGGACCGGCAGATCCAGGACATGCTCGCGA CCGACCCGATCCTGCGGCAGCTACCCACGGTGGTATCGGTCGTCGTGCTGCAGGGCAAACGCACTGCGCGGCTGGCGATG CCCAACGGCGTCATCCAGACGTTCGAGGAAGGCGACGAGATCGCGGACCGGATGCACCTGCGCAGCGTAGCGCTGCGCAT GGTGCGCGTGATGATCCAGCCGCTGCCAAACGCGAAGAGCCGCGCTCCTGTCTCCCTGCCCCTGAGTTTCCACGCGGCGC GCGCCACGGGCACGCCGGGATACCCGGGTGGCCTGCAGGGCGCAGGCGCTGGGCCCATCAGCGCGGTGCAGATGCCGGGC ATGCCAGCCGCGCCCTTGGCGATTCCGCCTGGCCTGGTCCAGGCGCCACCAGCCATACCCGCCACGCGGCCGCCCGCGGA GCAGCCGATGTCGACACCGCGGGCCGATGCATCGCAGGCGGCCGCTGGTTCGCCTTCGACATCCCCCTGA
Upstream 100 bases:
>100_bases GAGGCCGCGGGCCAGGTGTCGCTCTCGGGCGGCAGCAAGCGGGGCAGCGGCGACCGGACCATGTCCGTGATCGTCATGCA AGTCTTCGGGGGGCAGAAAA
Downstream 100 bases:
>100_bases GCGCCGGCATGAGGTCATGTATATGAAGTGGTTCGGACGATCTGGCGTGCGCAACGGCGCAGACGCGGACGGCCAGCTGG ACGACGCAGCGTCGAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MADGKSIGWGMLAAVALAAGAHAQPRTLADRAAEADVTLELLQKDRQIQDMLATDPILRQLPTVVSVVVLQGKRTARLAM PNGVIQTFEEGDEIADRMHLRSVALRMVRVMIQPLPNAKSRAPVSLPLSFHAARATGTPGYPGGLQGAGAGPISAVQMPG MPAAPLAIPPGLVQAPPAIPATRPPAEQPMSTPRADASQAAAGSPSTSP
Sequences:
>Translated_209_residues MADGKSIGWGMLAAVALAAGAHAQPRTLADRAAEADVTLELLQKDRQIQDMLATDPILRQLPTVVSVVVLQGKRTARLAM PNGVIQTFEEGDEIADRMHLRSVALRMVRVMIQPLPNAKSRAPVSLPLSFHAARATGTPGYPGGLQGAGAGPISAVQMPG MPAAPLAIPPGLVQAPPAIPATRPPAEQPMSTPRADASQAAAGSPSTSP >Mature_208_residues ADGKSIGWGMLAAVALAAGAHAQPRTLADRAAEADVTLELLQKDRQIQDMLATDPILRQLPTVVSVVVLQGKRTARLAMP NGVIQTFEEGDEIADRMHLRSVALRMVRVMIQPLPNAKSRAPVSLPLSFHAARATGTPGYPGGLQGAGAGPISAVQMPGM PAAPLAIPPGLVQAPPAIPATRPPAEQPMSTPRADASQAAAGSPSTSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21530; Mature: 21399
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGKSIGWGMLAAVALAAGAHAQPRTLADRAAEADVTLELLQKDRQIQDMLATDPILRQ CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LPTVVSVVVLQGKRTARLAMPNGVIQTFEEGDEIADRMHLRSVALRMVRVMIQPLPNAKS HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAPVSLPLSFHAARATGTPGYPGGLQGAGAGPISAVQMPGMPAAPLAIPPGLVQAPPAIP CCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC ATRPPAEQPMSTPRADASQAAAGSPSTSP CCCCCCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure ADGKSIGWGMLAAVALAAGAHAQPRTLADRAAEADVTLELLQKDRQIQDMLATDPILRQ CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LPTVVSVVVLQGKRTARLAMPNGVIQTFEEGDEIADRMHLRSVALRMVRVMIQPLPNAKS HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAPVSLPLSFHAARATGTPGYPGGLQGAGAGPISAVQMPGMPAAPLAIPPGLVQAPPAIP CCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC ATRPPAEQPMSTPRADASQAAAGSPSTSP CCCCCCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA