| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611315
Identifier: 120611315
GI number: 120611315
Start: 2909679
End: 2910140
Strand: Direct
Name: 120611315
Synonym: Aave_2647
Alternate gene names: NA
Gene position: 2909679-2910140 (Clockwise)
Preceding gene: 120611314
Following gene: 120611316
Centisome position: 54.36
GC content: 67.97
Gene sequence:
>462_bases ATGCCCTCGTGGACCGGCGGTAGCCCGGACTGCGCCGCGCCCTTCTGGAAGATCGACATGAATTCCCTGCACATCGCCCG CTTCACCGTGGCGTACTGGTGCGTTTTCGCGATGGCGCTCATGCCGGTCGCCTGCGCCGTGCTGGCCAAGCGCGGCGGGT TCAGGGCCGCGGACAACCACGATCCGCGCGGCTGGGCAGCGCGGCAGACCGACTGGCGCGCCCGCGCGCTCGCAGCCCAG TCCAATACCTTCGAGTGCCTGCCGTTCTTCATCGGCGCGGTGATCGTCGCGCACCAGCTGGGCGCCGCGCAGACCCTGCT CGACCTGCTGGCCCTGGCGTTCGTGATGCTGCGGATGTTCTACGTGCTGATGTACGTCTCCGACATGCCTGCCATCCGCA GCGCCGTCTGGCTGGGTGCCTTCGCGGTCAACACGGCCATTTTCTTCCTGGGCTACCGCTGA
Upstream 100 bases:
>100_bases AGCGAAACGCTCAAGGCGCGCGGCATGCACGTGACGCGTCTGGCGCGCGGCGTGCCGGTGGGCAGCGAACTGGAATACGT GGACCTGGGCACCATCGCCC
Downstream 100 bases:
>100_bases CCGTGCCCGCGGGCGGGTACCGCGCGCCAGGTGCCGGCCCGCCGGACCTGTTCCGGCTTCGTTTTCCTGATTTTCCTTGT GGTTTACAGGGATTTTCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPSWTGGSPDCAAPFWKIDMNSLHIARFTVAYWCVFAMALMPVACAVLAKRGGFRAADNHDPRGWAARQTDWRARALAAQ SNTFECLPFFIGAVIVAHQLGAAQTLLDLLALAFVMLRMFYVLMYVSDMPAIRSAVWLGAFAVNTAIFFLGYR
Sequences:
>Translated_153_residues MPSWTGGSPDCAAPFWKIDMNSLHIARFTVAYWCVFAMALMPVACAVLAKRGGFRAADNHDPRGWAARQTDWRARALAAQ SNTFECLPFFIGAVIVAHQLGAAQTLLDLLALAFVMLRMFYVLMYVSDMPAIRSAVWLGAFAVNTAIFFLGYR >Mature_152_residues PSWTGGSPDCAAPFWKIDMNSLHIARFTVAYWCVFAMALMPVACAVLAKRGGFRAADNHDPRGWAARQTDWRARALAAQS NTFECLPFFIGAVIVAHQLGAAQTLLDLLALAFVMLRMFYVLMYVSDMPAIRSAVWLGAFAVNTAIFFLGYR
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16929; Mature: 16798
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSWTGGSPDCAAPFWKIDMNSLHIARFTVAYWCVFAMALMPVACAVLAKRGGFRAADNH CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DPRGWAARQTDWRARALAAQSNTFECLPFFIGAVIVAHQLGAAQTLLDLLALAFVMLRMF CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVLMYVSDMPAIRSAVWLGAFAVNTAIFFLGYR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSWTGGSPDCAAPFWKIDMNSLHIARFTVAYWCVFAMALMPVACAVLAKRGGFRAADNH CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC DPRGWAARQTDWRARALAAQSNTFECLPFFIGAVIVAHQLGAAQTLLDLLALAFVMLRMF CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVLMYVSDMPAIRSAVWLGAFAVNTAIFFLGYR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA