Click here to switch to the map view.

The map label for this gene is recR

Identifier: 120611314

GI number: 120611314

Start: 2909102

End: 2909701

Strand: Direct

Name: recR

Synonym: Aave_2646

Alternate gene names: 120611314

Gene position: 2909102-2909701 (Clockwise)

Preceding gene: 120611313

Following gene: 120611315

Centisome position: 54.35

GC content: 71.83

Gene sequence:

>600_bases
ATGGCGCCCGGCTCCGACATGCATTCCCTCGATGCCCTCGTGCAGGCGCTGCGGCGCCTGCCGGGCGTGGGGGTGAAGTC
GGCCCAGCGCATGGCGTTCCACCTGCTGCAGCATGACCGGCAGGGCGCCGAGGTGCTGTCGCGCGCGCTGCACGACGCCG
CGCAGTCGGTGCGGCACTGCGCGCGCTGCCATACCTTCACCGAGGGCGAGGTCTGCTCGACCTGCCTCGATCCGTCGCGC
GACGCCTCCCGGCTGGCGGTGGTGGAGACCCCCGCGGACCAGGCCGCGCTCGAGCGCACCGGCGCCTTCCGGGGGCTGTA
CTTCGTGCTGATGGGCAAGCTGTCGCCGCTGGACGGCATCGGGCCGAAGGACATCGGTTTCGGCAAGCTGCTGGAGCGCG
CCGGCGACGGCGTGGTCCAGGAAGTCATCCTCGCCACCAATTTCACGGCCGAGGGCGAGGCGACCGCGCATGCCCTCAGC
GAAACGCTCAAGGCGCGCGGCATGCACGTGACGCGTCTGGCGCGCGGCGTGCCGGTGGGCAGCGAACTGGAATACGTGGA
CCTGGGCACCATCGCCCATGCCCTCGTGGACCGGCGGTAG

Upstream 100 bases:

>100_bases
CCGAGGAAACCTCGCAGGAGAAGATGGGCAAGCTGACCGCGGGCATGCCCGGCATGCCGCCCGGCATGAAGTTCCCGTTC
TGACCGGCGGCGTGCCCGCC

Downstream 100 bases:

>100_bases
CCCGGACTGCGCCGCGCCCTTCTGGAAGATCGACATGAATTCCCTGCACATCGCCCGCTTCACCGTGGCGTACTGGTGCG
TTTTCGCGATGGCGCTCATG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MAPGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHCARCHTFTEGEVCSTCLDPSR
DASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGIGPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALS
ETLKARGMHVTRLARGVPVGSELEYVDLGTIAHALVDRR

Sequences:

>Translated_199_residues
MAPGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHCARCHTFTEGEVCSTCLDPSR
DASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGIGPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALS
ETLKARGMHVTRLARGVPVGSELEYVDLGTIAHALVDRR
>Mature_198_residues
APGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHCARCHTFTEGEVCSTCLDPSRD
ASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGIGPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSE
TLKARGMHVTRLARGVPVGSELEYVDLGTIAHALVDRR

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=55.2631578947368, Blast_Score=200, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_ACIAC (A1TQI0)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_970992.1
- ProteinModelPortal:   A1TQI0
- SMR:   A1TQI0
- STRING:   A1TQI0
- GeneID:   4665252
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_2646
- NMPDR:   fig|397945.5.peg.2272
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   A1TQI0
- ProtClustDB:   PRK00076
- BioCyc:   AAVE397945:AAVE_2646-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21304; Mature: 21172

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI
HHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG
CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SELEYVDLGTIAHALVDRR
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APGSDMHSLDALVQALRRLPGVGVKSAQRMAFHLLQHDRQGAEVLSRALHDAAQSVRHC
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
ARCHTFTEGEVCSTCLDPSRDASRLAVVETPADQAALERTGAFRGLYFVLMGKLSPLDGI
HHHCCCCCCHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GPKDIGFGKLLERAGDGVVQEVILATNFTAEGEATAHALSETLKARGMHVTRLARGVPVG
CCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCC
SELEYVDLGTIAHALVDRR
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA