| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611281
Identifier: 120611281
GI number: 120611281
Start: 2864340
End: 2864750
Strand: Direct
Name: 120611281
Synonym: Aave_2613
Alternate gene names: NA
Gene position: 2864340-2864750 (Clockwise)
Preceding gene: 120611280
Following gene: 120611284
Centisome position: 53.51
GC content: 72.51
Gene sequence:
>411_bases ATGCGCCACCGCCTGCCCACCCTGCTGGCCGCCCTGTGGTGGGGCAGCCTTTCCGCGATCGGCTTCCTGGCCGTGCCCCT GCTGTTCGCGCACCTGCCGACGCCCGCCATGGCCGGGAACATGGCGGCCCGGCTGTTCGAGGCGCAGACCTTCGTTTCCG CCGCCTGCGGCATGGGCCTGCTCCTGGCCTCGCAGCGCAGGGGCGACGCGCCGCAGGAGGCCTGGGCGAAGGAGGCGATG CCCTGGATTATCGGCGGCCTGCTGCTGGCCTTGCTCGTGCAGTACGGCGTGGCGCCGCGCATCGTGGCGCGCACCCAGCT CAAGCTGTGGCACAGCGTGGGGACGGTGATGTATGCCTTGCAGTGGCTGTGCGCGCTGCGGGTGCTCTGGCGGGCCTGCG CGCCGCGATAG
Upstream 100 bases:
>100_bases ATACGGCCGAAGTGCAGGCGCCCGGCGGCCTGCGCCGCTACGAGGTCGTGGCCGTCCGCTACCAGTAAGCGGCACCGCTG CCCGCGCCGCCGAGCACGCC
Downstream 100 bases:
>100_bases GGCGTATCGGTAGAGGGGGCGCGCCGCCGCAGCCGGTGTCTTTTCCCGGCTCTCGCATGGCGGCAGGGCGGCCGAAGGAC TCGCCCTGCCGTGGCGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRHRLPTLLAALWWGSLSAIGFLAVPLLFAHLPTPAMAGNMAARLFEAQTFVSAACGMGLLLASQRRGDAPQEAWAKEAM PWIIGGLLLALLVQYGVAPRIVARTQLKLWHSVGTVMYALQWLCALRVLWRACAPR
Sequences:
>Translated_136_residues MRHRLPTLLAALWWGSLSAIGFLAVPLLFAHLPTPAMAGNMAARLFEAQTFVSAACGMGLLLASQRRGDAPQEAWAKEAM PWIIGGLLLALLVQYGVAPRIVARTQLKLWHSVGTVMYALQWLCALRVLWRACAPR >Mature_136_residues MRHRLPTLLAALWWGSLSAIGFLAVPLLFAHLPTPAMAGNMAARLFEAQTFVSAACGMGLLLASQRRGDAPQEAWAKEAM PWIIGGLLLALLVQYGVAPRIVARTQLKLWHSVGTVMYALQWLCALRVLWRACAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14904; Mature: 14904
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHRLPTLLAALWWGSLSAIGFLAVPLLFAHLPTPAMAGNMAARLFEAQTFVSAACGMGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLASQRRGDAPQEAWAKEAMPWIIGGLLLALLVQYGVAPRIVARTQLKLWHSVGTVMYAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QWLCALRVLWRACAPR HHHHHHHHHHHHHCCC >Mature Secondary Structure MRHRLPTLLAALWWGSLSAIGFLAVPLLFAHLPTPAMAGNMAARLFEAQTFVSAACGMGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LLASQRRGDAPQEAWAKEAMPWIIGGLLLALLVQYGVAPRIVARTQLKLWHSVGTVMYAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH QWLCALRVLWRACAPR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA