Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611269
Identifier: 120611269
GI number: 120611269
Start: 2848709
End: 2849209
Strand: Reverse
Name: 120611269
Synonym: Aave_2601
Alternate gene names: NA
Gene position: 2849209-2848709 (Counterclockwise)
Preceding gene: 120611270
Following gene: 120611268
Centisome position: 53.23
GC content: 69.86
Gene sequence:
>501_bases ATGCCTGCCCGCCCCATCTCCGACGAGACACTGCACCTCATCGATGCCGTGCGCCATGCACTGGCGCAGCGGTGCGGCCC CACCGGGCTGGAAGAACGCACGCTGTTCGGCTGCTGGGCCTTCTTCGTGGACGGCAAGCTCTGCGTCGGCGTGAAAGGCA CGGAACTGCTGGTGCGCCTGCCTCCGGAGCGCCACGGCGAATTCCAGGAAATGCAGAACACGCGCGAGCTCTCTCCCGGC GGCGGCATGCAGGGCTACTTCTGGATCGAGCCGCACGGCTATGCACGCGCCGCGCAGTGGGCCTTCTGGCTCGATGAAGC CCTGGCCTACAACCCGCGCGCCAAGGCGAGTCCGAAACGCCGGAAGGCGGCCACGACTGCGGCCACGGCCCCGGCGGCCC CGGTAACACCGCCGGCCCGTCGGAAGGCGGCACGACCGGCCCCGGGCGGAAAAGCCACGGGAGCCCCACGGCGCCACAGC ATTTTCGAGGCCGATGACTGA
Upstream 100 bases:
>100_bases CGAGATCATGCGCGTCATCATCGCCCGGCGCATGCTCGACGGCGGCGCGCCGGACGCGATCCGCTGAGCCCTGCCGTACC ACCGGCTGAAGTGCCTCCAG
Downstream 100 bases:
>100_bases GGGGGACGCATCCCGTCCGCCGGCCTGCACACCGATTCACCACCCCAAGGAGACAACACATGAAGATCGCATTCATCGGC CTGGGCAACATGGGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPARPISDETLHLIDAVRHALAQRCGPTGLEERTLFGCWAFFVDGKLCVGVKGTELLVRLPPERHGEFQEMQNTRELSPG GGMQGYFWIEPHGYARAAQWAFWLDEALAYNPRAKASPKRRKAATTAATAPAAPVTPPARRKAARPAPGGKATGAPRRHS IFEADD
Sequences:
>Translated_166_residues MPARPISDETLHLIDAVRHALAQRCGPTGLEERTLFGCWAFFVDGKLCVGVKGTELLVRLPPERHGEFQEMQNTRELSPG GGMQGYFWIEPHGYARAAQWAFWLDEALAYNPRAKASPKRRKAATTAATAPAAPVTPPARRKAARPAPGGKATGAPRRHS IFEADD >Mature_165_residues PARPISDETLHLIDAVRHALAQRCGPTGLEERTLFGCWAFFVDGKLCVGVKGTELLVRLPPERHGEFQEMQNTRELSPGG GMQGYFWIEPHGYARAAQWAFWLDEALAYNPRAKASPKRRKAATTAATAPAAPVTPPARRKAARPAPGGKATGAPRRHSI FEADD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18141; Mature: 18010
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARPISDETLHLIDAVRHALAQRCGPTGLEERTLFGCWAFFVDGKLCVGVKGTELLVRL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEC PPERHGEFQEMQNTRELSPGGGMQGYFWIEPHGYARAAQWAFWLDEALAYNPRAKASPKR CCHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH RKAATTAATAPAAPVTPPARRKAARPAPGGKATGAPRRHSIFEADD HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PARPISDETLHLIDAVRHALAQRCGPTGLEERTLFGCWAFFVDGKLCVGVKGTELLVRL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECCCCCEEEEEC PPERHGEFQEMQNTRELSPGGGMQGYFWIEPHGYARAAQWAFWLDEALAYNPRAKASPKR CCHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHH RKAATTAATAPAAPVTPPARRKAARPAPGGKATGAPRRHSIFEADD HHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA