Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611259
Identifier: 120611259
GI number: 120611259
Start: 2837068
End: 2838006
Strand: Direct
Name: 120611259
Synonym: Aave_2591
Alternate gene names: NA
Gene position: 2837068-2838006 (Clockwise)
Preceding gene: 120611258
Following gene: 120611260
Centisome position: 53.0
GC content: 73.06
Gene sequence:
>939_bases ATGCAGGCCATACCCTCGAGCCGGGCCGAACTGGTGCTGGACGCGCGCTGCGCCACGGGCGAGAGCCCGGTATGGCGCGC GGCGGAGGAATCGCTGTACTGGACCGATATTCCCCGCGCCGTGCTGCACCGCTGGTCGGCGCGCACTGGCGCCCGGACGC AATGGACGGCACCGGAGATGGTGGCCTGCATGGCCGCCTGGGCCGGCCGGCCGGGCCGCTGGATCGCCGGCCTGGAGACC GGGCTCTTCGCACTGGATGCGCCGCGGGACGGCGGTGCGCTGGCGGCCGAGCGCCTGGCCGGGGTGGCGCATGCGTCGCC CGGAATGCGTTTCAACGATGGGCGATGCGACCGGCAGGGGCGTTTCGTCGCGGGAACCATGCTGATGGACATGGCAGCCG CCTCCCCGGTGGGGGCCGTCTTCCGCTTCGGCGGCAGCGAGCTGGCTGCGGGCCGCGCCACGGATCTGGGACTCGGGCCG CTGATCGTGCCCAATGGCATCGCCTTCAGCCCGGACGGGCGGACGATGTACCTGTCGGACTCGCATCCGCAGGCACAGAA GATCTGGGCGTTCGATTACGACACCGCCACGGGAACCCCGCACGGCCGCCGCCTGTTCGTGGACATGGCGCCCCTGCCTG GGCGCCCGGACGGCGCGGCGATCGACGTGGACGGCGGCTACTGGATCTGCGGCAACGATGCCGGCCTGGTGCACCGCTTC ACCCCGGACGGCCGGCTGGACCGCTCGCTGGCGGTGCCGGTCAGAAAGCCGGCGATGTGCGCGTTCGGCGGCCCGCGGCT GGACACGCTCTTCGTCACTTCGATCCGGCCCGGTGCGGAGTCGGACCTGGCGGGCCAGCCCCTGGCCGGCGGCGTGTTCG CGCTGCATCCTGGCACGCAGGGCCTGCCGGAGCCCGAGTTCGATCCCGCGGCGCAGTGA
Upstream 100 bases:
>100_bases CGAAGGTGGAGGCGCAGCCGGCCCCCGCGCCGGACGACCCCGTAGCGGTTTTCCAGGGCGGGGGCTTCACGGCCCAGGGG CCGTTCGAGGGATGAGCGGC
Downstream 100 bases:
>100_bases TGGTCCGCGCGATGTGGCCTCCGCGATACGGTTCAGTTTCGAGTCAGCCCGCCATCCAAAGATCGTCTCCTTTTTTCACC TGACAGACGTCTCCAAGAGG
Product: gluconolactonase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MQAIPSSRAELVLDARCATGESPVWRAAEESLYWTDIPRAVLHRWSARTGARTQWTAPEMVACMAAWAGRPGRWIAGLET GLFALDAPRDGGALAAERLAGVAHASPGMRFNDGRCDRQGRFVAGTMLMDMAAASPVGAVFRFGGSELAAGRATDLGLGP LIVPNGIAFSPDGRTMYLSDSHPQAQKIWAFDYDTATGTPHGRRLFVDMAPLPGRPDGAAIDVDGGYWICGNDAGLVHRF TPDGRLDRSLAVPVRKPAMCAFGGPRLDTLFVTSIRPGAESDLAGQPLAGGVFALHPGTQGLPEPEFDPAAQ
Sequences:
>Translated_312_residues MQAIPSSRAELVLDARCATGESPVWRAAEESLYWTDIPRAVLHRWSARTGARTQWTAPEMVACMAAWAGRPGRWIAGLET GLFALDAPRDGGALAAERLAGVAHASPGMRFNDGRCDRQGRFVAGTMLMDMAAASPVGAVFRFGGSELAAGRATDLGLGP LIVPNGIAFSPDGRTMYLSDSHPQAQKIWAFDYDTATGTPHGRRLFVDMAPLPGRPDGAAIDVDGGYWICGNDAGLVHRF TPDGRLDRSLAVPVRKPAMCAFGGPRLDTLFVTSIRPGAESDLAGQPLAGGVFALHPGTQGLPEPEFDPAAQ >Mature_312_residues MQAIPSSRAELVLDARCATGESPVWRAAEESLYWTDIPRAVLHRWSARTGARTQWTAPEMVACMAAWAGRPGRWIAGLET GLFALDAPRDGGALAAERLAGVAHASPGMRFNDGRCDRQGRFVAGTMLMDMAAASPVGAVFRFGGSELAAGRATDLGLGP LIVPNGIAFSPDGRTMYLSDSHPQAQKIWAFDYDTATGTPHGRRLFVDMAPLPGRPDGAAIDVDGGYWICGNDAGLVHRF TPDGRLDRSLAVPVRKPAMCAFGGPRLDTLFVTSIRPGAESDLAGQPLAGGVFALHPGTQGLPEPEFDPAAQ
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
Organism=Homo sapiens, GI23111021, Length=296, Percent_Identity=31.4189189189189, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI4759036, Length=296, Percent_Identity=31.4189189189189, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI24646912, Length=282, Percent_Identity=25.886524822695, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646910, Length=282, Percent_Identity=25.886524822695, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24641471, Length=282, Percent_Identity=25.886524822695, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI18860103, Length=282, Percent_Identity=25.886524822695, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI24641469, Length=282, Percent_Identity=25.886524822695, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI45551448, Length=282, Percent_Identity=25.886524822695, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 - InterPro: IPR005511 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: NA
Molecular weight: Translated: 33006; Mature: 33006
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAIPSSRAELVLDARCATGESPVWRAAEESLYWTDIPRAVLHRWSARTGARTQWTAPEM CCCCCCCCCEEEEEEECCCCCCCHHHHHHCCEEECHHHHHHHHHHCCCCCCCCCCCCHHH VACMAAWAGRPGRWIAGLETGLFALDAPRDGGALAAERLAGVAHASPGMRFNDGRCDRQG HHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCC RFVAGTMLMDMAAASPVGAVFRFGGSELAAGRATDLGLGPLIVPNGIAFSPDGRTMYLSD CEEEHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEEEC SHPQAQKIWAFDYDTATGTPHGRRLFVDMAPLPGRPDGAAIDVDGGYWICGNDAGLVHRF CCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCCEEEEE TPDGRLDRSLAVPVRKPAMCAFGGPRLDTLFVTSIRPGAESDLAGQPLAGGVFALHPGTQ CCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCC GLPEPEFDPAAQ CCCCCCCCCCCC >Mature Secondary Structure MQAIPSSRAELVLDARCATGESPVWRAAEESLYWTDIPRAVLHRWSARTGARTQWTAPEM CCCCCCCCCEEEEEEECCCCCCCHHHHHHCCEEECHHHHHHHHHHCCCCCCCCCCCCHHH VACMAAWAGRPGRWIAGLETGLFALDAPRDGGALAAERLAGVAHASPGMRFNDGRCDRQG HHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCC RFVAGTMLMDMAAASPVGAVFRFGGSELAAGRATDLGLGPLIVPNGIAFSPDGRTMYLSD CEEEHHHHHHHHHCCCHHHHEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCEEEEEC SHPQAQKIWAFDYDTATGTPHGRRLFVDMAPLPGRPDGAAIDVDGGYWICGNDAGLVHRF CCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCCEEEEE TPDGRLDRSLAVPVRKPAMCAFGGPRLDTLFVTSIRPGAESDLAGQPLAGGVFALHPGTQ CCCCCCCCEEECCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCC GLPEPEFDPAAQ CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA