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The map label for this gene is ytbQ [H]

Identifier: 120611258

GI number: 120611258

Start: 2836223

End: 2837062

Strand: Direct

Name: ytbQ [H]

Synonym: Aave_2590

Alternate gene names: 120611258

Gene position: 2836223-2837062 (Clockwise)

Preceding gene: 120611247

Following gene: 120611259

Centisome position: 52.99

GC content: 67.14

Gene sequence:

>840_bases
ATGACAAATACCCGCACACAAAACGCCATGAGCCAGCCTTCCCGATTCCACCGACTGTTGCTGACCGGTGCCGCTGGCGG
CCTGGGACAGGTTCTGCGAGAGCGCGTCCGGCCTTTCGCCGAGATCGTGCGGCTTTCGGACATCGCGCAATTGGAACCGG
CGCGCGGCGATGCCGAAGAGGTGGTGGCCTGCGACCTGGCCGACAAGCCGGCCGTGGATGCGCTGGTGGCCGGCTGCGAC
GCCATCGTGCACCTGGGCGGGATATCGGTGGAGCGGCCGTTCGAACAGATCCTCGAGGCCAACATCAAGGGCGTCTTCCA
CATCTACGAAGGGGCACGCCGCCACGGGGTGAGGCGGGTGGTGTTCGCCAGTTCCAACCACGTGACCGGCTTCTACCGCC
AGGACGAGCGCATCGATGCCCTGGCGCGCCGCCGGCCCGATGGCTACTACGGCCTCTCGAAGTCGTTCGGAGAGGACATG
GCCAGTTTCTATTACGACCGCTATGGCATCGAGACGGTGAGCCTGCGCATCGGATCATCGTTCCCCGAGCCCCGCGACCG
GCGCATGATGAGCACCTGGTTGAGCTACGACGACCTGACGCAGCTGGTGCAGAAGGCGCTGTTCACGCCGGACGTGGGCC
ACACGGTGGTGTACGGGGCTTCGGCCAACCGCGACCAGTGGTGGGACAACCACGCGGCCTCCCACCTCGGGTATGCGCCC
AAGGACAGCTCCGAGCCGTTCCGCGCGAAGGTGGAGGCGCAGCCGGCCCCCGCGCCGGACGACCCCGTAGCGGTTTTCCA
GGGCGGGGGCTTCACGGCCCAGGGGCCGTTCGAGGGATGA

Upstream 100 bases:

>100_bases
GGTGGCGCATGTCGGTCGGCGGGGGCGGTGGGTGAGGGTAATCCCTTTGTGGAGGCGGCCATGGCGGTGATCATAATCCC
GTCGCGTTGTACGACAACAT

Downstream 100 bases:

>100_bases
GCGGCATGCAGGCCATACCCTCGAGCCGGGCCGAACTGGTGCTGGACGCGCGCTGCGCCACGGGCGAGAGCCCGGTATGG
CGCGCGGCGGAGGAATCGCT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTNTRTQNAMSQPSRFHRLLLTGAAGGLGQVLRERVRPFAEIVRLSDIAQLEPARGDAEEVVACDLADKPAVDALVAGCD
AIVHLGGISVERPFEQILEANIKGVFHIYEGARRHGVRRVVFASSNHVTGFYRQDERIDALARRRPDGYYGLSKSFGEDM
ASFYYDRYGIETVSLRIGSSFPEPRDRRMMSTWLSYDDLTQLVQKALFTPDVGHTVVYGASANRDQWWDNHAASHLGYAP
KDSSEPFRAKVEAQPAPAPDDPVAVFQGGGFTAQGPFEG

Sequences:

>Translated_279_residues
MTNTRTQNAMSQPSRFHRLLLTGAAGGLGQVLRERVRPFAEIVRLSDIAQLEPARGDAEEVVACDLADKPAVDALVAGCD
AIVHLGGISVERPFEQILEANIKGVFHIYEGARRHGVRRVVFASSNHVTGFYRQDERIDALARRRPDGYYGLSKSFGEDM
ASFYYDRYGIETVSLRIGSSFPEPRDRRMMSTWLSYDDLTQLVQKALFTPDVGHTVVYGASANRDQWWDNHAASHLGYAP
KDSSEPFRAKVEAQPAPAPDDPVAVFQGGGFTAQGPFEG
>Mature_278_residues
TNTRTQNAMSQPSRFHRLLLTGAAGGLGQVLRERVRPFAEIVRLSDIAQLEPARGDAEEVVACDLADKPAVDALVAGCDA
IVHLGGISVERPFEQILEANIKGVFHIYEGARRHGVRRVVFASSNHVTGFYRQDERIDALARRRPDGYYGLSKSFGEDMA
SFYYDRYGIETVSLRIGSSFPEPRDRRMMSTWLSYDDLTQLVQKALFTPDVGHTVVYGASANRDQWWDNHAASHLGYAPK
DSSEPFRAKVEAQPAPAPDDPVAVFQGGGFTAQGPFEG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 30818; Mature: 30687

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTRTQNAMSQPSRFHRLLLTGAAGGLGQVLRERVRPFAEIVRLSDIAQLEPARGDAEE
CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VVACDLADKPAVDALVAGCDAIVHLGGISVERPFEQILEANIKGVFHIYEGARRHGVRRV
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
VFASSNHVTGFYRQDERIDALARRRPDGYYGLSKSFGEDMASFYYDRYGIETVSLRIGSS
EEECCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
FPEPRDRRMMSTWLSYDDLTQLVQKALFTPDVGHTVVYGASANRDQWWDNHAASHLGYAP
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCC
KDSSEPFRAKVEAQPAPAPDDPVAVFQGGGFTAQGPFEG
CCCCCCCEEEEECCCCCCCCCCEEEEECCCEECCCCCCC
>Mature Secondary Structure 
TNTRTQNAMSQPSRFHRLLLTGAAGGLGQVLRERVRPFAEIVRLSDIAQLEPARGDAEE
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
VVACDLADKPAVDALVAGCDAIVHLGGISVERPFEQILEANIKGVFHIYEGARRHGVRRV
EEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEEE
VFASSNHVTGFYRQDERIDALARRRPDGYYGLSKSFGEDMASFYYDRYGIETVSLRIGSS
EEECCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCC
FPEPRDRRMMSTWLSYDDLTQLVQKALFTPDVGHTVVYGASANRDQWWDNHAASHLGYAP
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCC
KDSSEPFRAKVEAQPAPAPDDPVAVFQGGGFTAQGPFEG
CCCCCCCEEEEECCCCCCCCCCEEEEECCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8763940; 9387221; 9384377 [H]