Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611251
Identifier: 120611251
GI number: 120611251
Start: 2829763
End: 2831115
Strand: Reverse
Name: 120611251
Synonym: Aave_2583
Alternate gene names: NA
Gene position: 2831115-2829763 (Counterclockwise)
Preceding gene: 120611252
Following gene: 120611250
Centisome position: 52.89
GC content: 71.54
Gene sequence:
>1353_bases ATGGAACGCCTGCGCAGGCCTGCCCTGCTTTCGGCCCTGGCCCTGCTCGCCGCCTGTGCGAACCCATCCCCGGGCGCGCC CCCGTCCGTGCCCGCCGCGCCGGCACCGGGAGCCACGGCGCCGGAGGCCGCGGACCTTTCCATGCGGGAAAACAGCAGCC GCTACGTCATCGTCGCGCTCGCCAACCCGCTGCAGCGGGTTCCCGTGCGGGCGGCCACCAGCCCGGCCGGCTACGGAGCG CCACCGAGGTACACCACCGGCATGCACGCCGCCACCCTCGTGGAGCAGATCGCGCGGGAGCACCAGCTCGTCCAGGCCGC CGCCTGGCCCATCCCTTCGCTGAACGTGCACTGCATCGTGTTCGAGATCCTGGACAGCCGTCCGCGCGAGGAAGTGCTCG CGGCCCTCGCCAAGGATGACCGCATCGCCCTCGCCCAGCCGCTGCAGGACTTCTCGGTCCAGGAACAGCCGACGGCCAGA ACGGCGGACGCCGCTGTGGCCTACAACGATCCCTACGCCCCGTTGCAGCGTGGATTCATCGGCACGTCCGCCGCGCAGGC CCACCGCGTCACCACCGGCCGCGGCACGCACGTGGCTGTCATCGATACCGGTGCGCAGACAGGGCATCCGGACCTCCAGG GGCGCATTCTCGAAACCCACAACCTCGTGGACGACGATGCCGGCGCCTTCCAGAAGGACCGGCACGGTACCGAAGTGCTG GGCATCATGGCCGCCACCGGCAACAACCTGCAGGGCATCGTCGGCATGGCCCCCGCCGCCCGGTTCAGCCTCTACAAGGC CTGCTGGTACCCCGCCCAGCCGCCGGGCAGCGGCGCGCGCTGCAACTCGTTCACGCTCGCCAAGGCGCTCGTCGCCGTGA TGTCCTCCGACGCACGGATCGTCAACATGAGTCTCGGCGGCCCGAGCGACCCCCTTCTCGGGCAGTTGCTCTCCCAACTC GTCGGCCAGGGCCGGATCATCGTCGCCGCCGTACCTGCGGGCGGCCAGCGCGGCGGTTTCCCCGCAGGCGTGCCCGGCGT GCTCGCCGTGGATTCCGCCGGGGCACCGCGCACGCCTTCCCCCGGCGGCGTACTGCTCGCCCCCGGCACGGACATCCTCA CCCTCCAGCCGCAGGGACGATACGACTTCGCCTCGGGATCCTCCATGGCCGCTGCCCACGTGAGCGGCATGGTGGCGCTG CTCCAGTCGGTGGAGCCCCGCCTCGACAGGGACACCGTCGAGAGACTGCTGCTGCGCAGCGAAAACCAGGACGGCGCCCA GCCCGCCATGGTGAACGCCGAGCGTGCGCTGGCCACGATCTCTTCTTCCAGCCCGCGCTTCGCCGCCCGCTGA
Upstream 100 bases:
>100_bases CCTCCGGCACACAGGCGCTGGAGCAACTGCGGGCCACGGCGGGCATGCGGCTGGTCGAGCCCGCGGGGGATGCGCAGTGA GGCGCGCGGTGAAACGCGCC
Downstream 100 bases:
>100_bases AAGCGCCAGGCAGGCGGGCGGCCCCGAGCCCCTCCCGCCGCCGGCCTCCACTATTTTCCGGGCAGGGCCCGGCACGTCTC CACGTCCGCATCGCACGGCC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MERLRRPALLSALALLAACANPSPGAPPSVPAAPAPGATAPEAADLSMRENSSRYVIVALANPLQRVPVRAATSPAGYGA PPRYTTGMHAATLVEQIAREHQLVQAAAWPIPSLNVHCIVFEILDSRPREEVLAALAKDDRIALAQPLQDFSVQEQPTAR TADAAVAYNDPYAPLQRGFIGTSAAQAHRVTTGRGTHVAVIDTGAQTGHPDLQGRILETHNLVDDDAGAFQKDRHGTEVL GIMAATGNNLQGIVGMAPAARFSLYKACWYPAQPPGSGARCNSFTLAKALVAVMSSDARIVNMSLGGPSDPLLGQLLSQL VGQGRIIVAAVPAGGQRGGFPAGVPGVLAVDSAGAPRTPSPGGVLLAPGTDILTLQPQGRYDFASGSSMAAAHVSGMVAL LQSVEPRLDRDTVERLLLRSENQDGAQPAMVNAERALATISSSSPRFAAR
Sequences:
>Translated_450_residues MERLRRPALLSALALLAACANPSPGAPPSVPAAPAPGATAPEAADLSMRENSSRYVIVALANPLQRVPVRAATSPAGYGA PPRYTTGMHAATLVEQIAREHQLVQAAAWPIPSLNVHCIVFEILDSRPREEVLAALAKDDRIALAQPLQDFSVQEQPTAR TADAAVAYNDPYAPLQRGFIGTSAAQAHRVTTGRGTHVAVIDTGAQTGHPDLQGRILETHNLVDDDAGAFQKDRHGTEVL GIMAATGNNLQGIVGMAPAARFSLYKACWYPAQPPGSGARCNSFTLAKALVAVMSSDARIVNMSLGGPSDPLLGQLLSQL VGQGRIIVAAVPAGGQRGGFPAGVPGVLAVDSAGAPRTPSPGGVLLAPGTDILTLQPQGRYDFASGSSMAAAHVSGMVAL LQSVEPRLDRDTVERLLLRSENQDGAQPAMVNAERALATISSSSPRFAAR >Mature_450_residues MERLRRPALLSALALLAACANPSPGAPPSVPAAPAPGATAPEAADLSMRENSSRYVIVALANPLQRVPVRAATSPAGYGA PPRYTTGMHAATLVEQIAREHQLVQAAAWPIPSLNVHCIVFEILDSRPREEVLAALAKDDRIALAQPLQDFSVQEQPTAR TADAAVAYNDPYAPLQRGFIGTSAAQAHRVTTGRGTHVAVIDTGAQTGHPDLQGRILETHNLVDDDAGAFQKDRHGTEVL GIMAATGNNLQGIVGMAPAARFSLYKACWYPAQPPGSGARCNSFTLAKALVAVMSSDARIVNMSLGGPSDPLLGQLLSQL VGQGRIIVAAVPAGGQRGGFPAGVPGVLAVDSAGAPRTPSPGGVLLAPGTDILTLQPQGRYDFASGSSMAAAHVSGMVAL LQSVEPRLDRDTVERLLLRSENQDGAQPAMVNAERALATISSSSPRFAAR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 46688; Mature: 46688
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLRRPALLSALALLAACANPSPGAPPSVPAAPAPGATAPEAADLSMRENSSRYVIVAL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE ANPLQRVPVRAATSPAGYGAPPRYTTGMHAATLVEQIAREHQLVQAAAWPIPSLNVHCIV CCCHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE FEILDSRPREEVLAALAKDDRIALAQPLQDFSVQEQPTARTADAAVAYNDPYAPLQRGFI EEECCCCCHHHHHHHHHCCCCEEHHCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHCCC GTSAAQAHRVTTGRGTHVAVIDTGAQTGHPDLQGRILETHNLVDDDAGAFQKDRHGTEVL CCCHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCEEE GIMAATGNNLQGIVGMAPAARFSLYKACWYPAQPPGSGARCNSFTLAKALVAVMSSDARI EEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE VNMSLGGPSDPLLGQLLSQLVGQGRIIVAAVPAGGQRGGFPAGVPGVLAVDSAGAPRTPS EEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCC PGGVLLAPGTDILTLQPQGRYDFASGSSMAAAHVSGMVALLQSVEPRLDRDTVERLLLRS CCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC ENQDGAQPAMVNAERALATISSSSPRFAAR CCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MERLRRPALLSALALLAACANPSPGAPPSVPAAPAPGATAPEAADLSMRENSSRYVIVAL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE ANPLQRVPVRAATSPAGYGAPPRYTTGMHAATLVEQIAREHQLVQAAAWPIPSLNVHCIV CCCHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE FEILDSRPREEVLAALAKDDRIALAQPLQDFSVQEQPTARTADAAVAYNDPYAPLQRGFI EEECCCCCHHHHHHHHHCCCCEEHHCCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHCCC GTSAAQAHRVTTGRGTHVAVIDTGAQTGHPDLQGRILETHNLVDDDAGAFQKDRHGTEVL CCCHHHHHEEECCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCEEE GIMAATGNNLQGIVGMAPAARFSLYKACWYPAQPPGSGARCNSFTLAKALVAVMSSDARI EEEEECCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE VNMSLGGPSDPLLGQLLSQLVGQGRIIVAAVPAGGQRGGFPAGVPGVLAVDSAGAPRTPS EEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCC PGGVLLAPGTDILTLQPQGRYDFASGSSMAAAHVSGMVALLQSVEPRLDRDTVERLLLRS CCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC ENQDGAQPAMVNAERALATISSSSPRFAAR CCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]