Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611252
Identifier: 120611252
GI number: 120611252
Start: 2831136
End: 2831819
Strand: Reverse
Name: 120611252
Synonym: Aave_2584
Alternate gene names: NA
Gene position: 2831819-2831136 (Counterclockwise)
Preceding gene: 120611253
Following gene: 120611251
Centisome position: 52.9
GC content: 73.83
Gene sequence:
>684_bases ATGACGACACTCCCCCCCGCATCCGCCCATGGCCAGGACCAGGACCGGTCCCACCTGCTCACGCAGGAACTGCTGCCGTG GATCGTGAACGGCACGGCCACCGACGAGCAGCGCGCCGCGGCCGCCGGGCACCTCGCCGCCTGCCCGGACTGCCAGGCGG AACTGGCGCTGCAGGAGCGCATCCAGGCAGGCCTGCAGCTCCAGCCGGCCGCGGCGCTTCCCGATTGCGACGCGGGCTTG CAGCGGCTCATGCAGCGCATCGACCTCGATGCCCTGTGCGACCAGCCCGCCCCGCAAGCCGTGCCCCAGCCACGGCGGCA CGGATGGTCCACCTATGCGCTGGCAGCCGTGGCGCTGCTGCAGACCGCGGCCCTCGCGCTCGTGGGCTACCGCATGGCGG ACCAGGAGTCCTCCCCGTACCGGATGTTCAGCAGCCCGCAACCCACCCCCGACGCGGCGACTGGCGCGCAGGGCACGATC CGGGCGGTTCCCGACGAGCGGCTCACGCTGGCCGCCTGGAATGCGGCGCTGGCGGGCTCCGGCCTGCAGGTGGTCGGAGG CCCCAACGCCATGGGAGCCTATACGCTGGCCCCCCTGCCCGGAACCTCCGGCACACAGGCGCTGGAGCAACTGCGGGCCA CGGCGGGCATGCGGCTGGTCGAGCCCGCGGGGGATGCGCAGTGA
Upstream 100 bases:
>100_bases TGGGCACCGTCAAGGCCCGCATGTTCCATGCGCGCGTGAAACTGCGCAACCTGCTGCCCGGACTGGCGGTAGGCGGCACC GGCACCCAGGATATCCAACC
Downstream 100 bases:
>100_bases GGCGCGCGGTGAAACGCGCCATGGAACGCCTGCGCAGGCCTGCCCTGCTTTCGGCCCTGGCCCTGCTCGCCGCCTGTGCG AACCCATCCCCGGGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTTLPPASAHGQDQDRSHLLTQELLPWIVNGTATDEQRAAAAGHLAACPDCQAELALQERIQAGLQLQPAAALPDCDAGL QRLMQRIDLDALCDQPAPQAVPQPRRHGWSTYALAAVALLQTAALALVGYRMADQESSPYRMFSSPQPTPDAATGAQGTI RAVPDERLTLAAWNAALAGSGLQVVGGPNAMGAYTLAPLPGTSGTQALEQLRATAGMRLVEPAGDAQ
Sequences:
>Translated_227_residues MTTLPPASAHGQDQDRSHLLTQELLPWIVNGTATDEQRAAAAGHLAACPDCQAELALQERIQAGLQLQPAAALPDCDAGL QRLMQRIDLDALCDQPAPQAVPQPRRHGWSTYALAAVALLQTAALALVGYRMADQESSPYRMFSSPQPTPDAATGAQGTI RAVPDERLTLAAWNAALAGSGLQVVGGPNAMGAYTLAPLPGTSGTQALEQLRATAGMRLVEPAGDAQ >Mature_226_residues TTLPPASAHGQDQDRSHLLTQELLPWIVNGTATDEQRAAAAGHLAACPDCQAELALQERIQAGLQLQPAAALPDCDAGLQ RLMQRIDLDALCDQPAPQAVPQPRRHGWSTYALAAVALLQTAALALVGYRMADQESSPYRMFSSPQPTPDAATGAQGTIR AVPDERLTLAAWNAALAGSGLQVVGGPNAMGAYTLAPLPGTSGTQALEQLRATAGMRLVEPAGDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23673; Mature: 23542
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPPASAHGQDQDRSHLLTQELLPWIVNGTATDEQRAAAAGHLAACPDCQAELALQER CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH IQAGLQLQPAAALPDCDAGLQRLMQRIDLDALCDQPAPQAVPQPRRHGWSTYALAAVALL HHHCCEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHH QTAALALVGYRMADQESSPYRMFSSPQPTPDAATGAQGTIRAVPDERLTLAAWNAALAGS HHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHCCC GLQVVGGPNAMGAYTLAPLPGTSGTQALEQLRATAGMRLVEPAGDAQ CEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure TTLPPASAHGQDQDRSHLLTQELLPWIVNGTATDEQRAAAAGHLAACPDCQAELALQER CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHH IQAGLQLQPAAALPDCDAGLQRLMQRIDLDALCDQPAPQAVPQPRRHGWSTYALAAVALL HHHCCEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHH QTAALALVGYRMADQESSPYRMFSSPQPTPDAATGAQGTIRAVPDERLTLAAWNAALAGS HHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHCCC GLQVVGGPNAMGAYTLAPLPGTSGTQALEQLRATAGMRLVEPAGDAQ CEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA