Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611200
Identifier: 120611200
GI number: 120611200
Start: 2779245
End: 2779955
Strand: Direct
Name: 120611200
Synonym: Aave_2531
Alternate gene names: NA
Gene position: 2779245-2779955 (Clockwise)
Preceding gene: 120611198
Following gene: 120611203
Centisome position: 51.92
GC content: 55.7
Gene sequence:
>711_bases ATGCATGCTGGAGCCGGTAACCAGGTGACGGACATACGTGCAAGTCAGGGCGAAAGCTGGGCAAGGGATGTAATTGCGCG CAGGGACGGAGCGGCGACGAAATTGAAGCGGGCGCAAAAGTCCCAAGGTGGCAATTGCGCTGTGTTCGCATCGGTGGCTG GCGCAGCCTTGCACAATGAATCCCTCAGTGCTCCCATCATGCGGAGGAGGCAGTCTCTCCCTGACGGGGGGTCTCATGAA TTTCTTTTGATTGGAGATCCGCGGGTAGCGCGCTGGGGTGAATCCAAAACTGTTGTCGTGGATCCATGGCCCGGTCATCC CAGTGCTTGCACACTGGACCAAGCTGTTCTGCACGATTCGCGGACAGGTCAGTCGTATCCTCTCGCGCAACTCGCGGCCA ACTCGCGTATTCAGGGTGAAGCGTGGGCCGAGCGTGCACCTTCTGGCAAAGATTCAGGACGGATGGAGTCTATTAGTCCT TTGGGTCAAGAAGAGATCAATAAGCAGATGAGGAAAATGGGGTTGCCGCCTGTTGGCGAGCAACTTACGGCTCATGCACT TGCCGACGACAGTACCCGGTTGTTCGATGTCCGAGTCGGAACGGATCCCAGCACTCAATACATGGACCAAAGTGATGGGG AAACTCGAACATTCGATGATATTTCTGCAACTCTGCTGAATCAGCAATACGCTGGTCGTCAACGTCGCTGA
Upstream 100 bases:
>100_bases GGGCATCCGCAGACTCTACCTTTGACTTCCACTCCGAGGAGCAAAGTTCATAACACGCTCTAAGGCAGCTGGTCGAGCAA ATCGAATCACGAGAAATGTC
Downstream 100 bases:
>100_bases GACGATGGCTGAAGCGTGCGGCGTGCTCATGCCGCGCGCAGCGCGGCCAGCAGGCCCGCGCATGCATCCTCCACCACGTC CAGCACGTGCTCGAAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MHAGAGNQVTDIRASQGESWARDVIARRDGAATKLKRAQKSQGGNCAVFASVAGAALHNESLSAPIMRRRQSLPDGGSHE FLLIGDPRVARWGESKTVVVDPWPGHPSACTLDQAVLHDSRTGQSYPLAQLAANSRIQGEAWAERAPSGKDSGRMESISP LGQEEINKQMRKMGLPPVGEQLTAHALADDSTRLFDVRVGTDPSTQYMDQSDGETRTFDDISATLLNQQYAGRQRR
Sequences:
>Translated_236_residues MHAGAGNQVTDIRASQGESWARDVIARRDGAATKLKRAQKSQGGNCAVFASVAGAALHNESLSAPIMRRRQSLPDGGSHE FLLIGDPRVARWGESKTVVVDPWPGHPSACTLDQAVLHDSRTGQSYPLAQLAANSRIQGEAWAERAPSGKDSGRMESISP LGQEEINKQMRKMGLPPVGEQLTAHALADDSTRLFDVRVGTDPSTQYMDQSDGETRTFDDISATLLNQQYAGRQRR >Mature_236_residues MHAGAGNQVTDIRASQGESWARDVIARRDGAATKLKRAQKSQGGNCAVFASVAGAALHNESLSAPIMRRRQSLPDGGSHE FLLIGDPRVARWGESKTVVVDPWPGHPSACTLDQAVLHDSRTGQSYPLAQLAANSRIQGEAWAERAPSGKDSGRMESISP LGQEEINKQMRKMGLPPVGEQLTAHALADDSTRLFDVRVGTDPSTQYMDQSDGETRTFDDISATLLNQQYAGRQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25546; Mature: 25546
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAGAGNQVTDIRASQGESWARDVIARRDGAATKLKRAQKSQGGNCAVFASVAGAALHNE CCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHCCC SLSAPIMRRRQSLPDGGSHEFLLIGDPRVARWGESKTVVVDPWPGHPSACTLDQAVLHDS CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCC RTGQSYPLAQLAANSRIQGEAWAERAPSGKDSGRMESISPLGQEEINKQMRKMGLPPVGE CCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH QLTAHALADDSTRLFDVRVGTDPSTQYMDQSDGETRTFDDISATLLNQQYAGRQRR HHHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHAGAGNQVTDIRASQGESWARDVIARRDGAATKLKRAQKSQGGNCAVFASVAGAALHNE CCCCCCCCEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEHHHHHHCCC SLSAPIMRRRQSLPDGGSHEFLLIGDPRVARWGESKTVVVDPWPGHPSACTLDQAVLHDS CCCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCC RTGQSYPLAQLAANSRIQGEAWAERAPSGKDSGRMESISPLGQEEINKQMRKMGLPPVGE CCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCH QLTAHALADDSTRLFDVRVGTDPSTQYMDQSDGETRTFDDISATLLNQQYAGRQRR HHHHHHHCCCCCEEEEEEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA