Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120611170
Identifier: 120611170
GI number: 120611170
Start: 2737942
End: 2738718
Strand: Direct
Name: 120611170
Synonym: Aave_2501
Alternate gene names: NA
Gene position: 2737942-2738718 (Clockwise)
Preceding gene: 120611166
Following gene: 120611171
Centisome position: 51.15
GC content: 63.84
Gene sequence:
>777_bases ATGCCACCCCATCACTTTCCCAAGCCGGCGGCATCGCGGCTGCTTGCAACGATCACTGTGCTGTTCGCCATGTCCTGGTC GGCCTGCGCGGGGGATGCCACCGGGCAGCCGGCGGGTGCTCTGCCACCTCCCGGGCGGCCGGCGCCATCCGGAAGCGGTG CTTTGCAGCCGGGTGAATACCTGACGGAGCGAGGCTGGGGGCGCCTTGTGCTCAAGAGCGAGGGAGGGGTGATGGCTTTT TCGCTCGAAACGGTGACGGGTGACAACCTGTGCACGCTCGATGGAACCATCGACCGGGGGCAGGGCATCGCCAGGCAGGA CGGTGGGCGCTCTTCCTGCATGGTGGGCTTTGGCGTCAACGCACAGGGGGTCGATGTCAAGGCCGCCACTCCGGCCGAGT GCAGGGATTTCTGCGGCTACAACGGGAGTTTCGCGGGACGGTATTTGCGGGTGAAGCAAGGCTGCGGCAGGGACGAAGTC GATCGCACGCGTGCTGCGTTCCAGCGTCTTTACGACCAGAGAAACTTCAAGGCGGCCCTCGCCACCCTGTCTCCTTATAT GTCTCAGTTGGTTCCAACTTCAGTCGTCAAGGCAGGCCGGCCGGCCTTGGCCACTGAACGGGTTGACTCACCGCCGCGCA GCCTGTGTCTCCTGCGAGCGCGAGCTCGAATGACAGCCCAGGGCGCACGGTGGTGGTCCCTTTGTTCTGCCGCATCCCGA ATGGTTGACCGAACACATTTCGTATTCGTAAGGCTGGGAGTTGGAGAACCGCTATGA
Upstream 100 bases:
>100_bases GAGGGCATGCAGCACGGCCCTATCATGGCAGGATCTGCCGGCCCGGTTTCCAGGGTTCCAAGCTGCAACAGGGAATTTTT CCGCGAAGACCGCGCCCACC
Downstream 100 bases:
>100_bases GTGAACTCGTCTACGTGGGCATCGATATCGCCAAGAACAGCTTCGAAGTGGCTGTCACGGGCGAACTGCAGACGCTCAAT CTGGCCAACGACGAAGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPPHHFPKPAASRLLATITVLFAMSWSACAGDATGQPAGALPPPGRPAPSGSGALQPGEYLTERGWGRLVLKSEGGVMAF SLETVTGDNLCTLDGTIDRGQGIARQDGGRSSCMVGFGVNAQGVDVKAATPAECRDFCGYNGSFAGRYLRVKQGCGRDEV DRTRAAFQRLYDQRNFKAALATLSPYMSQLVPTSVVKAGRPALATERVDSPPRSLCLLRARARMTAQGARWWSLCSAASR MVDRTHFVFVRLGVGEPL
Sequences:
>Translated_258_residues MPPHHFPKPAASRLLATITVLFAMSWSACAGDATGQPAGALPPPGRPAPSGSGALQPGEYLTERGWGRLVLKSEGGVMAF SLETVTGDNLCTLDGTIDRGQGIARQDGGRSSCMVGFGVNAQGVDVKAATPAECRDFCGYNGSFAGRYLRVKQGCGRDEV DRTRAAFQRLYDQRNFKAALATLSPYMSQLVPTSVVKAGRPALATERVDSPPRSLCLLRARARMTAQGARWWSLCSAASR MVDRTHFVFVRLGVGEPL >Mature_257_residues PPHHFPKPAASRLLATITVLFAMSWSACAGDATGQPAGALPPPGRPAPSGSGALQPGEYLTERGWGRLVLKSEGGVMAFS LETVTGDNLCTLDGTIDRGQGIARQDGGRSSCMVGFGVNAQGVDVKAATPAECRDFCGYNGSFAGRYLRVKQGCGRDEVD RTRAAFQRLYDQRNFKAALATLSPYMSQLVPTSVVKAGRPALATERVDSPPRSLCLLRARARMTAQGARWWSLCSAASRM VDRTHFVFVRLGVGEPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27519; Mature: 27388
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPHHFPKPAASRLLATITVLFAMSWSACAGDATGQPAGALPPPGRPAPSGSGALQPGEY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LTERGWGRLVLKSEGGVMAFSLETVTGDNLCTLDGTIDRGQGIARQDGGRSSCMVGFGVN HHHCCCCEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCC AQGVDVKAATPAECRDFCGYNGSFAGRYLRVKQGCGRDEVDRTRAAFQRLYDQRNFKAAL CCCCEEECCCCHHHHHHCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH ATLSPYMSQLVPTSVVKAGRPALATERVDSPPRSLCLLRARARMTAQGARWWSLCSAASR HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH MVDRTHFVFVRLGVGEPL HHHCEEEEEEEECCCCCC >Mature Secondary Structure PPHHFPKPAASRLLATITVLFAMSWSACAGDATGQPAGALPPPGRPAPSGSGALQPGEY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LTERGWGRLVLKSEGGVMAFSLETVTGDNLCTLDGTIDRGQGIARQDGGRSSCMVGFGVN HHHCCCCEEEEECCCCEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCC AQGVDVKAATPAECRDFCGYNGSFAGRYLRVKQGCGRDEVDRTRAAFQRLYDQRNFKAAL CCCCEEECCCCHHHHHHCCCCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH ATLSPYMSQLVPTSVVKAGRPALATERVDSPPRSLCLLRARARMTAQGARWWSLCSAASR HHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH MVDRTHFVFVRLGVGEPL HHHCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA